Gene Smed_6255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6255 
Symbol 
ID5320557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1175273 
End bp1175875 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID640777855 
Producthypothetical protein 
Protein accessionYP_001314787 
Protein GI150378192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.580884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.147576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTC AGATCCGCAA GACGCTGCTC CAGATGGAAA CGACCCTAAT CGAGGGCGGG 
AAAGCCGCCC CTCAGCCGTT AAAGCTGTTT TCGGCGGTGG CGGTGTTGAA AAATCCGTGG
GCTGGGCACG GCTTCGTCGA GGATCTGAGG CCGGAGATTC ACAGAGCGGC ACCGGTACTG
GGCGAGCTTT TAACTAGGAT GATTATCGAT GCCGTTGGCT CCGCCGAGGC GGTTGAAGCT
TATGGGAAAG CCGCCGTGGT CGGGATCGAT GGCGAAATCG AGCATGCCTC GGCGCTCATC
CATACCTTGC GTTTCGGCAA TCATTATCGC CAAGCGGTTG GCGCCAAATC ATACCTGGCC
TTCTGCAATA CGCGCGGCCC TGCCAATGCC CCCATCATGA TCCCCCTGAT GGACAAGAAC
GACGAGGGGC GCCGTTCGCA CTACCTGACA ATCCAGACCG CAGTACCCGA TGCCCCAGCC
GCCGATGAAA TCGTGGTGGC TCTTGGCGCC TCGACTGGCG GACGTCCTCA TCACCGGATC
GGCGACCGTT ACGAGGATTT GAAGGAGCTT GGGCAAGATG TCACCAATCC GGCCGGTGTC
TGA
 
Protein sequence
MPVQIRKTLL QMETTLIEGG KAAPQPLKLF SAVAVLKNPW AGHGFVEDLR PEIHRAAPVL 
GELLTRMIID AVGSAEAVEA YGKAAVVGID GEIEHASALI HTLRFGNHYR QAVGAKSYLA
FCNTRGPANA PIMIPLMDKN DEGRRSHYLT IQTAVPDAPA ADEIVVALGA STGGRPHHRI
GDRYEDLKEL GQDVTNPAGV