Gene Smed_6102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6102 
Symbol 
ID5320404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1034826 
End bp1035968 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content58% 
IMG OID640777742 
Productmolybdopterin biosynthesis protein MoeB 
Protein accessionYP_001314674 
Protein GI150378079 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.202691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGGC AGGAACGTCT ATCACGTCTA CGGGAATCCT TGTCTCGGAT CAGTGTCGAG 
GAGGCAAGAC GGAAGCAAAA GGCTGGCGTC AAACTGATCG ATATTCGTGA CGCCGAAGAA
ACCGCCAAAG GCAGCCCTGT CGGCGCGGTA CGCATCAGCC GATCCTTTCT GGAATTGCAG
ATTGAAAACG TGGCGCCGGA TGCCGATACC GAGCTTATGG TACTCTGCGC CAGCGATACG
CGCGCGCTGT TTGCCGCAGA CGATCTCAAC CGCCTCGGCT ATTCTTCCGT TCATTGGGTC
GATGGCGGAT TTCAAGCCTG GGAGGCAGCC GGTCTTCCCG TTGAGAAACA CCGACAGCTG
AGCCCAGCGG AGAAGGAGCG ATACGCGCGC CATTTGAGCA TACCCGAAGT GGGGGCTGAG
GGTCAGGCGC TGCTTCTGTC CAAGAAGGTG GCTCTGGTCG GTGCTGGAGG CCTTGGCTCT
CCGCTGGCCT TTTATCTTGC GGCAGCAGGC ATTGGAACAT TGGGGCTGAT TGACAGCGAC
CGGCTCGAAC GGTCGAATCT TCAGCGGCAA ATCCTCCATA CCGACGACCG GATCGGGGAG
TTGAAGGTCA GTTCGGCCGC AAAATCTCTT CAGGCGTTCA ATCCGGACGT AGCTCTCAAT
CTCCATGAGA TACGGTTGAA CGAGAACAAT GCACTGGAAA TACTGGCCGA TTACGATCTG
GTGATCGACG GCAGCGACAA TCTGGCGACC CGCTACGTCG TGAGCGACGC CAGCACGCTG
CTTAGTATTC CCATGATTTA TGGCGCGATC TTCCGTTTCG AGGGACACGT TTCCGCATTT
TGGCCCAATG GCCCGTCCGG TGGCCCGTGC TATCGCTGTC TCTTTCCTGA AAAGCTGCCC
GCATCGCTCA CTCCATCCTG CTCCGAGGTC GGTGTGCTTG GCGTGTTACC GGGCGTCATC
GGGACGATCA TGGCAACGGA AGCGATCAAG ATCCTGCTCG GAATCGGCGA TCCGCTGATT
GGGCGTTTGC TGACCTACAA TGCCCTCGAT TGCTCTTTCC ACGACCTCGA GGTCCCCGCG
AACCCCCATT GCGAGCAGTG CCAATCCAAC CGGGATCTGC CACGCATGCG CGCCGGGTTG
TGA
 
Protein sequence
MLRQERLSRL RESLSRISVE EARRKQKAGV KLIDIRDAEE TAKGSPVGAV RISRSFLELQ 
IENVAPDADT ELMVLCASDT RALFAADDLN RLGYSSVHWV DGGFQAWEAA GLPVEKHRQL
SPAEKERYAR HLSIPEVGAE GQALLLSKKV ALVGAGGLGS PLAFYLAAAG IGTLGLIDSD
RLERSNLQRQ ILHTDDRIGE LKVSSAAKSL QAFNPDVALN LHEIRLNENN ALEILADYDL
VIDGSDNLAT RYVVSDASTL LSIPMIYGAI FRFEGHVSAF WPNGPSGGPC YRCLFPEKLP
ASLTPSCSEV GVLGVLPGVI GTIMATEAIK ILLGIGDPLI GRLLTYNALD CSFHDLEVPA
NPHCEQCQSN RDLPRMRAGL