Gene Smed_5993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5993 
Symbol 
ID5320295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp951772 
End bp952221 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID640777669 
ProductMucR family transcriptional regulator 
Protein accessionYP_001314601 
Protein GI150378006 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0950336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGAAT CGCGCTCAAA CGAACTAAGG CTTGAGCTCA CCAGCCGCAT CGTGTCCGCT 
TATTTGAGCC GCAATGTCAT TGCTCCCAGC GAACTCCCCC ATCTTATTCA GCAAACCTAC
GGCTCGCTGG GCAAGACTTC TGAACCCGCG AAAACTGCGG CCACAGTCGA GGAGCAACGC
CCCGCCGTGC CGATCAAGAA GTCTGTCACA GATGACTTCA TCGTCTGCCT TGAGGACGGC
AAGAGTTTCA AATCTCTGAA GCGACACTTG ATGGCAAAAT ACGCACTCAC GCCGGAGCAG
TATCGAGAAA AGTGGAAGCT CCCGGCCGAC TACCCGATGG TAGCTCCGAA CTATGCCAGG
AAGCGATCCG AGCTCGCACG CGCGACCGGC CTGGGAAAGA AATCGGCGGC AAAGCTCTCC
CCGTCTCTGC AAGCGGTAAG ATCGGCCTGA
 
Protein sequence
MTESRSNELR LELTSRIVSA YLSRNVIAPS ELPHLIQQTY GSLGKTSEPA KTAATVEEQR 
PAVPIKKSVT DDFIVCLEDG KSFKSLKRHL MAKYALTPEQ YREKWKLPAD YPMVAPNYAR
KRSELARATG LGKKSAAKLS PSLQAVRSA