| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5970 |
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| Symbol | |
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| ID | 5320272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 928849 |
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| End bp | 929574 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777651 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001314583 |
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| Protein GI | 150377988 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.392838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGAG CAGACAGACT ACTTCAGATC ATACAGATCC TGCGCCGCGA ACGCAGACCG
ATCAGTGGCC GCACCATCGC GTCGGAACTG GAGGTGTCCT TGCGAACGAT TTACCGCGAT
GTCGCAGCGT TGGAAGCATC CGGCGTGCCG GTTTTGGGCG AGCCGAGCGT CGGGTACGTG
CTGCAGGATG GCTACGATCT GCCACCACTG ATGTTTTCGA CGGACGAGTT GGAGATCGTC
ATGCTGGGAT TGCGCATGAT CGGAGCGCGG GGAGACATAG AAATCAATAC CACAGCGCGC
GACGTTGTCG CCAAGATCGC TGCCATTTTG CCGGATGCAA AGCGTTCTGA ATTCTTGACC
GCCCCCTTAC TTGCGCCTGG GCCGGAGGTC TTACCGGAGG ACGGCCCCGT GCTGCTCCAA
TTGCGAGGTG CGATGAAGGC TAATCGCAAG GTAGAAATAC TGTACCACGC CGCGGACCGT
GAGCCTGGGT GGCGCGTTAT CTGGCCAATC GTTATCGCAT TCTTCGATCG CGTCCGGGTG
CTCGCCGCGT GGTGCGAGCT TCGGGAGGCG TATCGTTATT TCCGGACCGA TAGGATGGTA
GAAGTCAATA TGCTTCCTGC GAAGATCCCT CGCTCGCGAA AGCGGATCTA CGCGGACTGG
TGGCATCACG AAAAAATGGA ACAAAGGTTA GGTATCGACG GCATGGGTGT TGTCGCTCGC
GCCTAG
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| Protein sequence | MRRADRLLQI IQILRRERRP ISGRTIASEL EVSLRTIYRD VAALEASGVP VLGEPSVGYV
LQDGYDLPPL MFSTDELEIV MLGLRMIGAR GDIEINTTAR DVVAKIAAIL PDAKRSEFLT
APLLAPGPEV LPEDGPVLLQ LRGAMKANRK VEILYHAADR EPGWRVIWPI VIAFFDRVRV
LAAWCELREA YRYFRTDRMV EVNMLPAKIP RSRKRIYADW WHHEKMEQRL GIDGMGVVAR
A
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