Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5930 |
Symbol | |
ID | 5320232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 893648 |
End bp | 894151 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777623 |
Product | FixH family protein |
Protein accession | YP_001314555 |
Protein GI | 150377960 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5456] Predicted integral membrane protein linked to a cation pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.926776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG CAACGAAACA GTGCAGTCCG GAGCGCGGAT TCACCGGTTG GCACATGGTG GCGGTCATGA GCCTCTTCTT CGGCACCATC ATCTCCGTCA ACCTCGTCAT GGCCTGGAAC GCAAGCCGAA GCTGGAGCGG CCTTGTCGTA GAGAACACGT ATATCGCTAG CCAGCAGTTC AACGGCAAGG TAGCCGAGGG TCGCGCCTTT CAGGCCAGCG GCATCAAGGG GCGGCTAACG GCCGGACGCG ACGCAGTCCG CTACGTCCTT ACCCGCAACG GAGAACCGGA GCGACAAATC GACAAGGTTA TCGCCGTTTT CAAACGACCG GTTGAGGAGC ATGAGGACCT TCGCGTCGAG CTCCACCCTC GGGGCGAGGG CGTTTTTGTT TTGGGTGAAG AGCTGCGGGC CGGTCAATGG ATCGCCGCCA TGACGGCCAT GGAGGGGGAT GCGGTGGTCC ACCGTCACAC TGTACGCTTC ATCGCAGAGG GAAGAGACAA ATGA
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Protein sequence | MSTATKQCSP ERGFTGWHMV AVMSLFFGTI ISVNLVMAWN ASRSWSGLVV ENTYIASQQF NGKVAEGRAF QASGIKGRLT AGRDAVRYVL TRNGEPERQI DKVIAVFKRP VEEHEDLRVE LHPRGEGVFV LGEELRAGQW IAAMTAMEGD AVVHRHTVRF IAEGRDK
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