Gene Smed_5930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5930 
Symbol 
ID5320232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp893648 
End bp894151 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID640777623 
ProductFixH family protein 
Protein accessionYP_001314555 
Protein GI150377960 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.926776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG CAACGAAACA GTGCAGTCCG GAGCGCGGAT TCACCGGTTG GCACATGGTG 
GCGGTCATGA GCCTCTTCTT CGGCACCATC ATCTCCGTCA ACCTCGTCAT GGCCTGGAAC
GCAAGCCGAA GCTGGAGCGG CCTTGTCGTA GAGAACACGT ATATCGCTAG CCAGCAGTTC
AACGGCAAGG TAGCCGAGGG TCGCGCCTTT CAGGCCAGCG GCATCAAGGG GCGGCTAACG
GCCGGACGCG ACGCAGTCCG CTACGTCCTT ACCCGCAACG GAGAACCGGA GCGACAAATC
GACAAGGTTA TCGCCGTTTT CAAACGACCG GTTGAGGAGC ATGAGGACCT TCGCGTCGAG
CTCCACCCTC GGGGCGAGGG CGTTTTTGTT TTGGGTGAAG AGCTGCGGGC CGGTCAATGG
ATCGCCGCCA TGACGGCCAT GGAGGGGGAT GCGGTGGTCC ACCGTCACAC TGTACGCTTC
ATCGCAGAGG GAAGAGACAA ATGA
 
Protein sequence
MSTATKQCSP ERGFTGWHMV AVMSLFFGTI ISVNLVMAWN ASRSWSGLVV ENTYIASQQF 
NGKVAEGRAF QASGIKGRLT AGRDAVRYVL TRNGEPERQI DKVIAVFKRP VEEHEDLRVE
LHPRGEGVFV LGEELRAGQW IAAMTAMEGD AVVHRHTVRF IAEGRDK