Gene Smed_5914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5914 
Symbol 
ID5320216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp880576 
End bp881166 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID640777608 
Producthypothetical protein 
Protein accessionYP_001314540 
Protein GI150377945 
COG category[S] Function unknown 
COG ID[COG4185] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.254692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCCA GCCTTGTCCT GCTTGCGGGA CCGAATGGCG CTGGCAAGTC TACCCTCTAC 
CAGACCCGCG TTGCTCCACG CTTCGCGGGT CCTTTCGTCA AAGCGGACAT CATCCAGCGC
AAGGAGATCA AGGACGCCTC CACGGAAGCG TCCTATAAGG CAGCCGAGGT TGCGCGCGAC
CGTCGGGCGG AGTTGTTTGG CTCAGGCAAG AGCTTTGCGA CCGGGACCGT CTTCTCCCAT
CCATCGAAAC TGGAAATCAT CGACGAGGCA CGGTCGCGCG GCTACATCGT CATCGTCATG
CACGTCGGCG TAGAGAGTCC TGATCTCTCG GTTGCACGGG TCAAAGGGCC GGTCGGCGAA
GGCGGCCATG ACGTTCCGGA AGAGAAGATA CGAACACGCT ACACCCGTGG ACAGCCACTC
ATCCGCAAAG CCATCCTGCG TTCCGACCGC GGTATGGTTT TCGACAACTC CCGCCTCAAC
GAGCCCCCTC GTCAGGTTCT TGCATTTGCG AATGGGCGTC TTCTGGAAGC CGCTTACCGA
CTACCCGACT GGGTACTCTC GGTTTATGCC GACGACCTCC AAGTCCGCTG A
 
Protein sequence
MRPSLVLLAG PNGAGKSTLY QTRVAPRFAG PFVKADIIQR KEIKDASTEA SYKAAEVARD 
RRAELFGSGK SFATGTVFSH PSKLEIIDEA RSRGYIVIVM HVGVESPDLS VARVKGPVGE
GGHDVPEEKI RTRYTRGQPL IRKAILRSDR GMVFDNSRLN EPPRQVLAFA NGRLLEAAYR
LPDWVLSVYA DDLQVR