Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5903 |
Symbol | |
ID | 5320205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 868905 |
End bp | 869891 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777598 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001314530 |
Protein GI | 150377935 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.22808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCCAA AGGTTCTGAT GACCGCAAAG ACGCTTGCTA CGCCGGGGCT GGCCCTGCTC GAGCAAGCCG GCTGCGCGGT CTCCTTTCTT AAGGAAGGCA CGGAAGCGGA ACTCGCAGAA AGTCTGCGGT CGACTCCCTT CGATGCCGTC ATCTCCCGCA CCTTGGCGCT ACCGGCAATG ATGATCGAGA CGGCACCTGC CCTGCGCGTC ATCTCCCGCC ACGGTGTCGG CTATAATAAT GTCGATATCG AAAGCGCCAC CCGGCGCGGA GTGCCGGTGC TGATTGCCGA TGGCGCGAAT GGCAAATCGG TCGCCGAACT TGCCGTCGGC CTCGCCCTTT CGGTGGCCCG CAAAATCACG ACGCAAGACG CCTCGATTCG CGCCCGCCAG TGGAATCGCT CTGCCTACGG CCTGCAATTT GCCGGCAAGA CGGCAGGGAT CGTCGCCTTC GGTGCGATCG GCCGGCGGGT AGCGGAAATT CTGAGGGCAA TGGACATGCG GATCATCGCC TTCGACCCCC ATGCGCGCGA CCGTTCCACG ACCGGGGTCG ATTGGACCGA GACGCTGGAC GAACTCCTGC AGGAAAGCGA TCTCGTTTCG CTTCATTGCC CGTTGACGCC GGAGACCCGC AACATGATCA CCGCGCCGCG GCTGGCGCGG ATGAAGCCGG GCGCAATCCT GATCAATACC GCGCGTGGCG GCCTGATCGA CGAAAAGGCA TTGGCCGAGG CCGTTCTTTC CGGACATCTT GCCGGTGCAG GTCTCGACAC CTTCGCCGAT GAACCCCTCC CCGCCGACCA TCCGTTCCTT TCTCTGCCGC AGATCGTGAT GACTCCGCAT ATGGGCGGAA GCACCGACGT CGCGCTTGAT GGCGTTGCGA TCAGCGCAGC GCGCAACGTG CTCGACGTCC TGATCGACGG CAAGGTCGAT CGCCGTCTTC TCGTCAACCC GGCGGTTCTC GAACACCGCA CCGTCGAAGC AAAGTGA
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Protein sequence | MGPKVLMTAK TLATPGLALL EQAGCAVSFL KEGTEAELAE SLRSTPFDAV ISRTLALPAM MIETAPALRV ISRHGVGYNN VDIESATRRG VPVLIADGAN GKSVAELAVG LALSVARKIT TQDASIRARQ WNRSAYGLQF AGKTAGIVAF GAIGRRVAEI LRAMDMRIIA FDPHARDRST TGVDWTETLD ELLQESDLVS LHCPLTPETR NMITAPRLAR MKPGAILINT ARGGLIDEKA LAEAVLSGHL AGAGLDTFAD EPLPADHPFL SLPQIVMTPH MGGSTDVALD GVAISAARNV LDVLIDGKVD RRLLVNPAVL EHRTVEAK
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