| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5899 |
|---|
| Symbol | |
|---|
| ID | 5320201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 863309 |
|---|
| End bp | 864523 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640777594 |
|---|
| Product | protein of unknown function DUF395 YeeE/YedE |
|---|
| Protein accession | YP_001314526 |
|---|
| Protein GI | 150377931 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0653542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.677854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA TTTCCCTTGA TCGTTCGCGT CATTTGCCGC CAGTGACGGT CGACCGTGCC
CCGGCGCTCG TCGCCGGATG CGCGCTGCTC GGCGGCTTTC TCGCGATTGC GCAGCTGGTC
GATCTGCGGC AGGCGGCGCT CTTCGCCGTC GGCGCGCTGC TGGGGGTCGC CCTTTATCAC
GGCTCCTTCG GTTTTACCGG TGGTTGGCGG CGTATGGTCG TCGAGCGCCG CGGCCGTGGC
ATCCGCGCGC AGATGCTGAT GATCGGTGTG GCGGCAGTTG CCATGATCCC GCTGATCTCG
GCAGGTAGCC TCGGTGGCCA GCCACTCGTC GGCGCGCTGG CGCCGGTAGG GGTCTCGGTG
CTCGTCGGCG CTGCCCTGTT CGGGCTCGGC ATGCAACTCG GCGGCGGCTG CGGCTCGGGC
ACATTGTTCA CCGTGGGCGG CGGCTCGGCG CGCATGCTCG TCACGCTCGC CTTCTTCATC
GTCGGCGCGC TGATCGGTAC GGCGCATCTA CCGTGGTGGC TGACGCTCCC GTCCTTCGGC
ACGATCGATC TCGGCCGGCA GCTTGGGACC GGCGCTGCCA TACTGGCGAC GCTTGCCGGC
CTAGGGGTTG TTTCGCTGCT AACTGCCCTG GTCGAACAGC GGGCCCACGG CGATGTAGAG
CGGGAGCCGG CACCCTCGCG CCAGGGCTGG ACATGGGTGC TATACGGCCC TTGGCCTTTG
GTCGGAGCGG GGCTGCTCAT GGCTCTGCTC AACATTGCGA CGCTGCTGCT CGCCGGCCAT
CCCTGGTCGG TTACCTTTGG CTTCGGCCTG TGGGGCGCCA AGGCGGCGCA GATCGCCGGC
GTTCCGGTCG CCGATTGGGC GTTCTGGAAC TGGCCGGGCC CGCGAACGGC GCTCAACAGC
AGCGTGCTCG CCGACATCAC CTCGGTGATG AATTTCGGCA TTATCCTCGG CGCAGCAATT
GCGGCGAGCC TCACCGGTAA ATTCGCGCCG AAGGCGAAGA TCCCGCTCGG CTCCGTACTG
GCGGCCGCTA TCGGCGGTCT GTTGATGGGC TACGGCGCGC GGCTTTCCTT CGGATGCAAT
ATAGGTGCGC TGTTTTCCGG CATCGCTTCG GGTAGCCTGC ACGGGTGGCT GTGGTTTGCG
GCTGCCTTTG TCGGTTCACT CGCCGGTATC TGGATGCGCC CGCTGTTCGG GCTCGAGGGG
CTCGCGAGGA AATGA
|
|---|
| Protein sequence | MTDISLDRSR HLPPVTVDRA PALVAGCALL GGFLAIAQLV DLRQAALFAV GALLGVALYH
GSFGFTGGWR RMVVERRGRG IRAQMLMIGV AAVAMIPLIS AGSLGGQPLV GALAPVGVSV
LVGAALFGLG MQLGGGCGSG TLFTVGGGSA RMLVTLAFFI VGALIGTAHL PWWLTLPSFG
TIDLGRQLGT GAAILATLAG LGVVSLLTAL VEQRAHGDVE REPAPSRQGW TWVLYGPWPL
VGAGLLMALL NIATLLLAGH PWSVTFGFGL WGAKAAQIAG VPVADWAFWN WPGPRTALNS
SVLADITSVM NFGIILGAAI AASLTGKFAP KAKIPLGSVL AAAIGGLLMG YGARLSFGCN
IGALFSGIAS GSLHGWLWFA AAFVGSLAGI WMRPLFGLEG LARK
|
|---|
| |