| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5851 |
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| Symbol | |
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| ID | 5320153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 813889 |
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| End bp | 814788 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777546 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314478 |
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| Protein GI | 150377883 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.905079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC TGACCAGCAT GGCTGTCTTC GTCAAAGCGG TCGATCTCGG CTCGTTTGCC
GCGGCGGCGG AAGCGCTCGA CCTATCCGGG CCGATGGTCG GCAAACATGT TCGGTTTCTG
GAGGATCGGC TCGGCGTGCG GCTTATAAAC CGTACCACCC GGCGGCAGAG CCTGACGGAA
TTCGGCTGCG TCTATTACGA GCGCTGCCGG GTAGTGCTCG CGGAAGCGCA GGCAGCGGAC
GCGCTTGCCG CCGATCAGCT TTCCGAGCCC AGCGGCAAGC TGCGCGTGAC GATGCCGGTC
CATTTCGGCC GGCACTGCGT CATCCCGGTA TTGCTGGAGC TCGCTCGAAG ATATCAGGCA
CTGGAACTTG ATCTGTCGTT CAGTGATCGC CTTATTGACC TCGCCGAAGA CGGCTATGAT
CTCTCCATTC GAACTGGCTT GTTGGAGGAC AGGGCCGGAT TGATAGCCCG CCGTGTCGCA
CGACAGCCGA TGATCGTTTG CGCCTCACCC GCCTATCTGG AACCGCATGG CTATCCCGAG
ACGGTAGAGG ATCTGTCGCA GCACGCGGCA ATCGTCTATC GCCGGTCCGG ACCGGTCCCA
CCTTGGCTCT TTCCAAGGGA GGGACAACGC CCGATCGAGG TAACGCCGCT CCACCGGTTC
AGCCTCGACG ACCTCGATGC GATAGCGGAC GCCGCCATGG CGGGGATGGG GCTTGCCTGG
CTTCCTTTAT GGCTGGTGCG GAACCGGATC GAGGAGGGCA GGCTCGTGCG GCTTCTGCCC
GAGCAGGCGC CATTTCTCTA TGATTGTCAC GCCTTGTGGC TGCAGACGCC GCATTTGCCG
CTCAAAGTTC GCGTTGCAAT CGATGCCTTG GCGGCTCAAT TGCCCAAATT CATGACCTGA
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| Protein sequence | MDRLTSMAVF VKAVDLGSFA AAAEALDLSG PMVGKHVRFL EDRLGVRLIN RTTRRQSLTE
FGCVYYERCR VVLAEAQAAD ALAADQLSEP SGKLRVTMPV HFGRHCVIPV LLELARRYQA
LELDLSFSDR LIDLAEDGYD LSIRTGLLED RAGLIARRVA RQPMIVCASP AYLEPHGYPE
TVEDLSQHAA IVYRRSGPVP PWLFPREGQR PIEVTPLHRF SLDDLDAIAD AAMAGMGLAW
LPLWLVRNRI EEGRLVRLLP EQAPFLYDCH ALWLQTPHLP LKVRVAIDAL AAQLPKFMT
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