Gene Smed_5839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5839 
Symbol 
ID5320141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp804030 
End bp804683 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID640777535 
Producthypothetical protein 
Protein accessionYP_001314467 
Protein GI150377872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTGCC GCAGATTCTG GCGATCCGGA CCTTTTTCGA CGCTCTGCGG GGGCACGAGA 
AAGACCAAGC TCTCGGTCCG AGGCCCGGTC CGCTGTTGTC AGCAACCTAC CGCGCTGGGC
GGGCTGGTCG ATGCCGATGA ACTGCAAGTC CTCGCCGAGA TCGAGGGCCA GCGCCGGCTA
CTCGCAAAGC GCGGCAATTC CGAAGAGCGC GGCGCCTGGT TTTGGGCCTG GGACGTCATG
GTTTCCGTCT CCGGCGTCGC CTGGCACCGA GCCCGCGAGC TTGGTTTCAC AGGCTGGTTT
TGCGACCGGG CCCATGTCGC GCTGCTCGCG GATTTCATCG CAGAGTTCGA CGAACTGACC
GATGAGCCCA GTCATCCTGC GCTTAACCCT GAGCCCGCGG TCGGATATCC CGAGGGCAGA
ATCTGGCGGC CCGACTACGG CATGAGGGGA CCGTGGCCTG ATCTCTCCGT CCGCGCAGCC
GGCGGGAACA GCTTGGCCTG CTTCGAACCC AGAGCGGTCC GGTCGGTCCG GCCGGGGCGC
CCTGGGATCT GGTGTGGAAA GGAGCGCCAG ACTATTCGGT CATCCGTCTC GAAGCAGCAA
TGCGCTTCCA AAAGAGCGTT GACAACAGCT GAAGGCGAAT CTATCAAAAG GTAG
 
Protein sequence
MACRRFWRSG PFSTLCGGTR KTKLSVRGPV RCCQQPTALG GLVDADELQV LAEIEGQRRL 
LAKRGNSEER GAWFWAWDVM VSVSGVAWHR ARELGFTGWF CDRAHVALLA DFIAEFDELT
DEPSHPALNP EPAVGYPEGR IWRPDYGMRG PWPDLSVRAA GGNSLACFEP RAVRSVRPGR
PGIWCGKERQ TIRSSVSKQQ CASKRALTTA EGESIKR