| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5823 |
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| Symbol | |
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| ID | 5320125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 789144 |
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| End bp | 790181 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777519 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001314451 |
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| Protein GI | 150377856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.63499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.440829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGTG ATGACAATTT CGTGCCTGTT ATTCTGGTCA ACCTCCTGGG TACTGCCGGC
ATCGTTGTTT GGCACATCCA GGGCGGCAAC CGCCCGACGA GCCGCTTGCT CGTCCAGATC
CTGTTCTTTA CCGGCATGAG CCTCGTGCTC TATATGGCAG GCATCGCACC TCATCGGCCA
GACGGTCTCT ATACGCAGGG CTTTGGTGCG CTGCTTTCCA AATCAGCCAG GATCCTGTGG
TGGACTCATC TCGCCTGGGC GATCATCGGG TTCATCCAAA TCTACTTCAG ATTGAACCGC
AAGCCACGCG AAGCGCGTCT CATCCAGGAT ATGGCCATAG CCATCATCTA TCTAGGCGTG
GCGCTGTCCG TAATCGGTTT CGTCTTCGAC ATGCCGGTTG GCACGTTGGT CACAACGTCG
GGCGTGATAG CCGTTATCTT CGGCCTTGCG TTGCAGAATA CGCTCGGAGA CGTCTTTTCC
GGCATCGCGC TGACACTCGG CAGAGCCTAT GCAATAGGCG ACTGGATCCA TTTGACCGAC
GGAACCGAGG GGCGCATCAT CGAAACCAAC TGGCGCTCCA CCAACCTGCT GACCGTTACC
CACAACGTCG TCGTGCTGCC GAACAGCATC CTAGCAAAGC AGGGAGTGAC AAATCTCAGC
CGTCCTGACG AGACCCACCA AATCGCGGTG CGTGTGCGCA TCGCCGCAAC GCAAGCACCG
CGCCTTGTCG ACGAAGTCAT GCGGTCTGTG CTACAATCCA GCGTCCTGAT CATCAAGAAT
CCACCGCCGG TCGTCGTCCT AAAAGCCATC GACGCCATCG CCATCGAAGT CGAGCTGCAA
TTTCACGTCG ACAGCGTTGC CGTTCGAACG CCGGCCAGGA ACGAGATCGT AGACTTGATC
CATGATCAAT GCAAAGTAGG AGGGCTTTCT CTGGCCATGC CTGCCGAAAG CCTCGCTTTC
GTGCCGGCAC CGATGGGAAA CAATGCTGCC GTGAGCAACG ATTCATTCAT CTCGATCGAT
CTAGGTCGCC GCCGATAA
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| Protein sequence | MFGDDNFVPV ILVNLLGTAG IVVWHIQGGN RPTSRLLVQI LFFTGMSLVL YMAGIAPHRP
DGLYTQGFGA LLSKSARILW WTHLAWAIIG FIQIYFRLNR KPREARLIQD MAIAIIYLGV
ALSVIGFVFD MPVGTLVTTS GVIAVIFGLA LQNTLGDVFS GIALTLGRAY AIGDWIHLTD
GTEGRIIETN WRSTNLLTVT HNVVVLPNSI LAKQGVTNLS RPDETHQIAV RVRIAATQAP
RLVDEVMRSV LQSSVLIIKN PPPVVVLKAI DAIAIEVELQ FHVDSVAVRT PARNEIVDLI
HDQCKVGGLS LAMPAESLAF VPAPMGNNAA VSNDSFISID LGRRR
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