Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5798 |
Symbol | |
ID | 5320100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 772623 |
End bp | 773378 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777502 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_001314434 |
Protein GI | 150377839 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.475551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00243591 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACTC GACTTTTTGA CCTGACGGGC AAGCGCGCCC TCATCACCGG CTCCTCGCAA GGGATTGGTT ATGCCTTGGC AAAGGGGCTT GCTGCGGCCG GCGCCGCGGT CATCCTGAAC GGCCGCGACG AGGCAAGGTT GAGGGCGGCA GCCGAGAGTC TTGGGGCAGG GCATACACTC GCCTTCGACG CGACGGATCA CGCGGCCGTG CGCAAGGCTA TCGACGCCTT CGAGGCGGAG ACCGGTGCGA TCGACATCCT CGTCAATAAT GCCGGCATGC AGCACCGTAC GCCGCTGGAG GACTTCCCCG CCGATGCTTT CGAGCAAATC CTGAAGACAA ACATATCGAC CGTCTTCAAT GTCGGCCAGG CCGTGGCCCG CCATATGATC AGGCGCGGCG CCGGCAAGAT CATCAATATC GCAAGTGTCC AGACGGCACT CGCCCGCCCC GGTATTGCGC CCTATACCGC AACCAAGGGT GCGGTGGGCA ATCTCACCAA GGGTATGGCG GCGGATTGGG CCAAACACGG CCTGCAATGC AACGCGATCG CGCCCGGCTA TTTCGACACG CCGCTGAACG CCGCTCTTGT CGCCGACCCG GCCTTTTCCG CCTGGCTCGA AAGCCGCACT CCGGCTGGCC GCTGGGGCAG GGTCGAGGAA TTGGTCGGCG CCTGCATCTT CCTCTCGTCG GACGCCTCCT CATTTGTAAA TGGACACGTG CTCTATGTGG ACGGCGGCAT CACCGCGTCG CTCTGA
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Protein sequence | MSTRLFDLTG KRALITGSSQ GIGYALAKGL AAAGAAVILN GRDEARLRAA AESLGAGHTL AFDATDHAAV RKAIDAFEAE TGAIDILVNN AGMQHRTPLE DFPADAFEQI LKTNISTVFN VGQAVARHMI RRGAGKIINI ASVQTALARP GIAPYTATKG AVGNLTKGMA ADWAKHGLQC NAIAPGYFDT PLNAALVADP AFSAWLESRT PAGRWGRVEE LVGACIFLSS DASSFVNGHV LYVDGGITAS L
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