Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5795 |
Symbol | |
ID | 5320097 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 767635 |
End bp | 769120 |
Gene Length | 1486 bp |
Protein Length | |
Translation table | |
GC content | 63% |
IMG OID | 640743372 |
Product | |
Protein accession | |
Protein GI | |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000250107 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000209549 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATCTG ATCTTTCGAG CCAGCTCGTT CTCGGTCAGC GGCCTGAGGG ACGGACCCTG ATGACCTCCC AATGCGTGCT TGCCTGGCGC GATGGCGGCC ACTCTCTGAT CCCTGATGGG GAAATCGTGG TCGAGGGCAA CAAGGTGCTT TATGCGGGAC CGCGTTTCGG GGGAGAAGTG GCGCGCCGTA TCGATTTCGG TCGCGCGCTG CTCAGCCCCG GCCTGATCGA CCTCGATGCC GGATCTGGAC ACCTACCTGC TCGTCCATGA CAACCAGCCG GGTTGGGCGA AAGGGCGCAT CTGGCCGCGC TCCTACGTAG AGCGCGGGCC CTACGAAATG TATTCCGCCG AGGAGCTGGC GTTCCAGAAG CGTTTCGCTT TCGGCCTGCT GCTGCTGAAC GGCATCACTA CCGCCGCGCC CATCGCATCG CTCTACTATC GCCAATGGGC CGAAACGGTC GCTGAATTCG AGGCCGCGGC CGATGCGGCG GGCGATCTGG GGCTCAGGGT CTTTCTGAGC CCCGCCTATC GTTCCGGCGG TCTTATCCTT GAGGAGCCGG GGCGCATCGC GCCCATGTTC GATGAGGCGC GGGGCGTGCA GGGCCTTGAG GAAGCGGTCG ATTTCATCGA GCGCAACCAT GGCCGTCATA ACGGCCTCGT CAATGGAATG CTGGCACCGG ACCGGATCGA AACCTGCACA TTGCCCTTGT TGCAGCGCAC CGTGGCGGCG GCGCGCGATC TCGACTGTCG CGTCAGGCTT CACATGGCGC AGGGCAATCT GGAACGCGAC ATCATGCTCA AGCTGCATGG CGTTTCCGGG CCGCAATGGC TGGCGGATCA CGGGCTGATG GACGAAAGGC TGATCGCCCC GCACGGGACC CACGCCTCGG CGCAGGATCT GCAGCTATAC GCGCATTATG GTGTCTCGAT TGCGCATTCG CCGCTCGTGT CGGCGCGCAT GGGCAGCATT CTCAATTCCT TCGCCGCCTG CCATAATCTC GGCATCAATA TAGGCATGGC TACAGATACG GCACCGCCCG ACATGCTGAT GAACCTGCTG GTCGGGTTGA TGGCATGCCG TATCAGCGAA AAGGCCTCGG ATGCCATATT CTCGAAGGAT CTGTTCGATG CCGCCACGAT CGGCGGCGCG AAAGCACTGG GGGCCAGCGA TCTCGGGCGG CTCGCCGCCG GCGCGAAGGC GGATATTGCC GTCTTCCGCC TCGACGATAT CCATATGACC CCGAGCGTCG ATCCCATCAC CACGCTGGTC GTCGGCGGTT CCGGCAAGGT GACGCAGGCC GTCTTTGTCG ACGGGCGGCT TTCGATGCTG AACGGCAAGG TTGCCGGCAT TGACATGATT GCGGCGCGCG AACAGGCGCA GGCACAGTAT GACGGCCTGA TCGCCAGATA TCCTGATCGG AGCTGGCAGC ATCCGCCTGT CGGAAAAATC TTCTCTCCGA GCTATCCGAT ATGGACCGCC GATTAG
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Protein sequence | |
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