Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5745 |
Symbol | |
ID | 5320047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 712891 |
End bp | 713847 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777458 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001314390 |
Protein GI | 150377795 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAGA GCCTTTCCTT CATCCGTGAC CTTGGAAAAC ATCGCGAAGC CTCGGTGCTT GCGATGCTGG CGGCGGTGGC CATTTATTTG TCATTTGCCA GCGATTACTT CCTTGAGCCG CGCAACCTGC TCAATGTCGG CCGGCAGGCC TCAGTCGTCG CGATCGTGGC GCTGGGCCAG GCGCTGGTCA TCATCGCCCG CGGCATCGAC CTCTCGGTTG GTTCTGTCAT CGGCCTTTCC GCCGTGGTCG GGGCGGTTCT GATGCGCGAT ACCGGCAGCG AGACGATCGG GCTGGTCGGT GGCCTTGCGA CGGGTCTTGC CTGCGGCGTG GTCAACGGCT TGCTATATAC CCGCTTCCGC ATCAATCCGT TCATCGCCAC GCTCGGCACG CTGTCAATCG CTCGCGGCAT CGCGTTATTG ATGACAGGCG GCATTCCGGT GCCATTCGGC GGCTTCGCCG AATTCGTTGG TGCGGGCCGC ATCCACAATA TACCGGTCTC GTTCCTGCTG ATGATCGTGC TGGCGATTAT CGTTCACATC TTCGCCGTCA GAACTGTGAC CGGCCGCGAG ATTTACGCGA TCGGCGACAA TCCCAAGGCG TCACGCCTGG CTGGCGTCAA CATCCACTAT ATTAGGCTTT TTGTCTTTGC GCTATGCGGC CTGCTCGCGG GGCTCGGCGG ACTGATCCTT GCTGGCAATC TCGCCAGTGC CGATCCCAAT CTCGGCATGG GTTACGAGCT AGACGTTATC GCCGCCGTAA TCCTAGGAGG AACCGCGCTC AGCGGGGGCC GCGGTTCGAT CATCGGTGTC ATCATCGGCG CGCTGCTGAT GGCGCTGCTC AACAACGCAT TCGTGTTGCT CGGCATCTCC GCCTATTGGC AGGTGGTGAC CAAGGGGCTC GTGATCATCT TCGCGGTGGG CTTGGATGGG CTCCAGCGCC GCGGCGACGA CGACTGA
|
Protein sequence | MNQSLSFIRD LGKHREASVL AMLAAVAIYL SFASDYFLEP RNLLNVGRQA SVVAIVALGQ ALVIIARGID LSVGSVIGLS AVVGAVLMRD TGSETIGLVG GLATGLACGV VNGLLYTRFR INPFIATLGT LSIARGIALL MTGGIPVPFG GFAEFVGAGR IHNIPVSFLL MIVLAIIVHI FAVRTVTGRE IYAIGDNPKA SRLAGVNIHY IRLFVFALCG LLAGLGGLIL AGNLASADPN LGMGYELDVI AAVILGGTAL SGGRGSIIGV IIGALLMALL NNAFVLLGIS AYWQVVTKGL VIIFAVGLDG LQRRGDDD
|
| |