| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5591 |
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| Symbol | |
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| ID | 5319893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 557089 |
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| End bp | 558744 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777336 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314268 |
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| Protein GI | 150377673 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.395056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACC TTGTAGAAAT CCGTGACTTG AAGGTCGAAG CCACCACCGA TTCCGGCCGC
AAGGTCGAGA TCATCAAGGG CGTCAGCCTC GATGTCGCCG AGGGCGAGAT CGTCGCTCTG
ATCGGCGAAA GCGGCTCGGG CAAGACGACG ATCGCCCTGA CGCTGATGGG ATATGCCCGC
CCGGGCTGCC GCATCTCCGG CGGCAGCGTC TCGGTCGCCG GCAATGACTT GGTGACGCTG
ACGGAAAAGC AGCGAGCCAA GGTGCGCGGC ACCGAGGTCA CCTATGTTCC GCAATCCGCT
GCAGCCGCTT TCAACCCGGC CGCGACGATC ATGGACCAGG TGATCGAAAT CACCCGCATC
CACGGACTCA TGCCGGTCGT CGAGGCGCGC GCACGCGCCG TCGAGCTTTT CCGGGCGTTG
TCGCTACCCG AGCCCGAGAC GATCGGCAGC CGCTATCCGC ACCAGGTTTC CGGCGGACAA
CTGCAGCGTT TATCGGCCGC CATGGCCCTC ATCGGCGACC CGAAGCTCGT CATCTTCGAC
GAGCCGACAA CGGCGCTCGA CGTAACGACC CAAATCGAGG TGCTACGCGC CTTCAAGTCC
GTGATGAAGA AGGGCGGCAT CGCCGGCGTC TACGTCTCGC ATGACCTCGC GGTCGTCGCT
CAGATCGCCG ACCATATTGT CGTGTTGAAG GCCGGCGAGG TACAGGAGGC CGGCACCACC
GAGGAAATCC TTTCGAACGC CAAGCACCCC TATACGCGCG AACTCCTCTC GGCCTTTGAA
CCAAAGCCGC GGGAGGCTGC CGACGCAGCC GAGAGCGCAC CGGCTCCCCT GCTAAAGATC
GAAAATCTGG TCGCGGGATA CGGTGCGTCC AAGAGCGATG GCTTGCCGCT CGTGCGCGCC
GTTGAAGATG TGAGCCTCAA GGTGGAAAAG GGTCGCAACC TCGGCATCAT CGGCGAGTCG
GGTTGCGGCA AGTCGACGCT CGCCCGCGCC ATTGCCGGCA TATTGCCGGC CGCCGTCGGC
AAGATCGTCT TCGATGGCAA GGAACTCGGC CGCAGCGCCC GCGAGCGCAC GCGCGACCAG
CTGCGCGAAA TGCAGATCGT CTTTCAATAT GCCGACACCG CCCTCAACCC GGCGAAATCC
GTCGAGGACA TTCTCGACCG ACCGCTCGTC TTCTATCATG GGATGAATGC AAGGGCCCGC
AGCCTCCGCA TCGACGAGCT GCTCGACATG GTGCGCCTGC CTCGCAACCT GCGTCATCGC
CGGCCGGGCG AGCTTTCCGG CGGCCAAAAA CAGCGCGTCA ACTTCGCGCG CGCGCTCGCC
GCCGATCCAA AGCTGATCCT TTGCGATGAG ATCACTTCGG CACTCGACAC GGTCGTCGCC
GCCGCGGTCA TCGAGCTGCT GAAGGAATTG CAGCGCGAGC TCGGTCTATC TTACATCTTC
ATCAGCCACG ACCTCTCAGT GGTGGAAGCG ATCTGCGACG AGATTGTCGT GATGTATGGC
GGCAGAAAGG TTGAGGACAT CACTCCGGCC AGGATCAATG CGCCGCACCA CCCCTATTCG
CAGCTGCTCT TCTCCTCGGT GCCAAAGCTC GATCCCGCCT GGCTCGATGG CCTCGAGCAG
GATCCGGAAT TGGTCAGGGC CTACTGCCGG AGGTAG
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| Protein sequence | MVNLVEIRDL KVEATTDSGR KVEIIKGVSL DVAEGEIVAL IGESGSGKTT IALTLMGYAR
PGCRISGGSV SVAGNDLVTL TEKQRAKVRG TEVTYVPQSA AAAFNPAATI MDQVIEITRI
HGLMPVVEAR ARAVELFRAL SLPEPETIGS RYPHQVSGGQ LQRLSAAMAL IGDPKLVIFD
EPTTALDVTT QIEVLRAFKS VMKKGGIAGV YVSHDLAVVA QIADHIVVLK AGEVQEAGTT
EEILSNAKHP YTRELLSAFE PKPREAADAA ESAPAPLLKI ENLVAGYGAS KSDGLPLVRA
VEDVSLKVEK GRNLGIIGES GCGKSTLARA IAGILPAAVG KIVFDGKELG RSARERTRDQ
LREMQIVFQY ADTALNPAKS VEDILDRPLV FYHGMNARAR SLRIDELLDM VRLPRNLRHR
RPGELSGGQK QRVNFARALA ADPKLILCDE ITSALDTVVA AAVIELLKEL QRELGLSYIF
ISHDLSVVEA ICDEIVVMYG GRKVEDITPA RINAPHHPYS QLLFSSVPKL DPAWLDGLEQ
DPELVRAYCR R
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