Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5572 |
Symbol | |
ID | 5319874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 538657 |
End bp | 539163 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777320 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_001314252 |
Protein GI | 150377657 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.974641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0628347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA GAGCTGTTTT GGCTGGTGGC TGCTTCTGGG GGATGCAGGA CTTGATCCGC AAGCTCCCCG GCGTCATCGA GACCCGCGTG GGTTACACCG GCGGCGACGT GCCGAATGCG ACCTACCGCA ATCACGGCAC GCACGCCGAA GGCATCGAGA TCATCTTCGA TCCCGAGAGG ATCAGCTACG GGCGGATTCT GGAGCTGTTC TTCCAGATCC ACGATCCGAC TACGAAGAAC CGACAGGGCA ACGACATCGG CACCTCCTAC CGCTCGGCGA TTTACTACGT CGACGACGAG CAGAAGCGAA TAGCCGAGGA GACGATTGCA GACGTCGAGG CCTCTGGCCT GTGGCCGGGC AAGGTCGTGA CCGAAGTCGA GCCGGTGGGA GACTTCTGGG AGGCGGAGCC GGAGCACCAG GATTACCTGG AGCGCTACCC CAACGGCTAC ACTTGCCATT TCCCGCGCCC CGACTGGGTC CTACCCCGGC GGTCGGCGGC CGAGTAA
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Protein sequence | MTKRAVLAGG CFWGMQDLIR KLPGVIETRV GYTGGDVPNA TYRNHGTHAE GIEIIFDPER ISYGRILELF FQIHDPTTKN RQGNDIGTSY RSAIYYVDDE QKRIAEETIA DVEASGLWPG KVVTEVEPVG DFWEAEPEHQ DYLERYPNGY TCHFPRPDWV LPRRSAAE
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