Gene Smed_5572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5572 
Symbol 
ID5319874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp538657 
End bp539163 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID640777320 
Productmethionine sulfoxide reductase A 
Protein accessionYP_001314252 
Protein GI150377657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.974641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0628347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA GAGCTGTTTT GGCTGGTGGC TGCTTCTGGG GGATGCAGGA CTTGATCCGC 
AAGCTCCCCG GCGTCATCGA GACCCGCGTG GGTTACACCG GCGGCGACGT GCCGAATGCG
ACCTACCGCA ATCACGGCAC GCACGCCGAA GGCATCGAGA TCATCTTCGA TCCCGAGAGG
ATCAGCTACG GGCGGATTCT GGAGCTGTTC TTCCAGATCC ACGATCCGAC TACGAAGAAC
CGACAGGGCA ACGACATCGG CACCTCCTAC CGCTCGGCGA TTTACTACGT CGACGACGAG
CAGAAGCGAA TAGCCGAGGA GACGATTGCA GACGTCGAGG CCTCTGGCCT GTGGCCGGGC
AAGGTCGTGA CCGAAGTCGA GCCGGTGGGA GACTTCTGGG AGGCGGAGCC GGAGCACCAG
GATTACCTGG AGCGCTACCC CAACGGCTAC ACTTGCCATT TCCCGCGCCC CGACTGGGTC
CTACCCCGGC GGTCGGCGGC CGAGTAA
 
Protein sequence
MTKRAVLAGG CFWGMQDLIR KLPGVIETRV GYTGGDVPNA TYRNHGTHAE GIEIIFDPER 
ISYGRILELF FQIHDPTTKN RQGNDIGTSY RSAIYYVDDE QKRIAEETIA DVEASGLWPG
KVVTEVEPVG DFWEAEPEHQ DYLERYPNGY TCHFPRPDWV LPRRSAAE