Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5436 |
Symbol | |
ID | 5319738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 393468 |
End bp | 395591 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640777199 |
Product | site-specific DNA-methyltransferase (adenine-specific) |
Protein accession | YP_001314131 |
Protein GI | 150377536 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2189] Adenine specific DNA methylase Mod |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.81891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGAC TGACAGAACA AGAGCAGCAG GAGATCATTC GTTTTATCGA GGCCGATAAG CCGTTGCCCG ACAAGTACCG CTTCCTGCTT TTTAGCGACA AGCGCGAGGT CGAGCTTGTA TGGAATGGCA AAACCAATGA CGTCTGCAAC GTCGTTCTGC CATTTCAGAC GATAGAGCAG GTAGACGAGC CGCGAGCGGA AAAACCAGAA GACACAGCCG CACAACAGGA TTTATTTTCG ACGGACAGCA GGGGGCGGCA GCTTCAAGGT TGGAATAACA AGCTCATCTG GGGCGACAAT AAGCTCATCC TTTCATCACT AAAGAATGGA CCACTGCGCC AGGAAATCGA ACGGCATGGT GGCTTGAAGT TGATCTACAT CGATCCGCCC TTCGACGTGG GAGCCGATTT TTCGATGGAT ATCGAGATTG GCGACGACAC ATTCACAAAG AAACCAAACA TCCTGGAAGA GATCGCGTAT CGCGATACCT GGGGACGTGG GGCAGACTCG TTTATAGCCA TGATTTACGA GCGCCTCATA CTCTGTCGTG ATCTGTTAGC AGATGAGGGT AGCATATTCG TTCACTGCGA TTGGCGAGTG AACTGGGCAA TCCGTAGCGT AATGAATGAA ATATTCGGCG CAAATTTTTT TAGAAACGAG ATTATCTGGC ACTACGAAAA CAAGCTAGGA ACCGGCTGGG GTGCAAAGAC CTTTGATACC CGCCACGATG TCCTTCTGCG GTTTTCAAAA GGCAAGAAAT ACGTTCACAA CGAAATTGCA GAAAAGGTCA AAGTCGAGAA GATGCAGCCT GTCACGAAGA AAGTTGAAGG CGAGCGCATC TGGCTTAGAA ATGACGATGG AAGCCTAATG TACGCTGAGG GGGCTAAGGA GCGCCCTGTC GGAGACGTAT GGACCATTCC CATCATCAAT CCAGTTGCCA CGGAGCGATT GAACTATCCA ACCCAGAAGC CAGAGAAGCT GATAGAAAGA ATCATCCTAT CCGGCAGCAA TGAGGGTGAT CTTATTGCGG ACTTCTTTGT GGGCTCCGGG ACCACCGCAG CTGTCGCCGA GAAACTTGGC CGCAAATGGA TCGTCAGCGA TCTCGGAAAG TTTGCCGTAC ACACAACGCG TAAGCGGATG ATTGGTGTGC AACGAGGATT GAAAGCCGAA GGCAAGGACT ACCGCGCCTT CGAAATTCTC AATCTGGGGC GTTATGAGCG CCAACACTAT GTTGGTGTGA ACCCGAATTT ACGCGAGGAG CAGCGTCAGA AGCAGCTGGA GGAAAAGGAA ACTGCCTTTT TGGACCTCAT TCTGCATGCC TATCGGGCCG AGCGGACGGA CGGTTTCGCC AGTTTCCACG GAAAAAGAGC CGGACGGCTC GTCGCCGTCG GTCCGGTCAA CATGCCCGTG TCGCGACTGT TTGTAGAAGA AATCATTCTT GAATGCCGCA AGAAGCATAT CACCAAGGTC GATATTCTCG GCTTCGAGTT TGAGATGGGC CTGTTTCCAA ATGTGCTGGA CGACGCCCGG ACCAAAGGCA TCGATATTTC CCCGAAATAC ATACCGGCGG ATGTTTTTGA TAAGCGAGCG GTCGAGAAGA ATCAGGTCGT GTTCCATGAC GTGTCTTTCA TTGAAGTGAG ACCGCACGTT AAAGGTGGCA GCATCGCTGT CGAACTGACA GATTTTTCGG TGTTCTATTC CCAGGATTCC ATCGCCAACG CCGAAGCCAC CCTCAAAGAC AAGGGCAGCA AGATCGTCGT CGAGAAGGGC CAAATTATCA AAGTCAGTAA GGATAAGAAC GGCATTGTCA GCCGTGAAAT GCTCACGCAG AACTGGACCG ATTGGATTGA TTATTGGTCC GTGGACTTCG ATTTTGAGAA CAAGCGGGAG ATCATCCGCA CTCAGAATCC CGATACCGGG GATTGGGAAG AATCATGGAC CGGCGACTAT ATTTTTGAAA ACGAGTGGCA GTCCTTCCGC ACCAAAAAGG ACCGAAAGTT GGAGCTGACT AGTGTTTTCC ACGAGTGCCC GCCGGGACGG CGGAAGATCG CGGTTAAGGT CGTGGACATC TTTGGCAATG ACACCATGAC GATTGCCGAA GTAGCGGTGG GAGCGCAAAA GTAA
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Protein sequence | MARLTEQEQQ EIIRFIEADK PLPDKYRFLL FSDKREVELV WNGKTNDVCN VVLPFQTIEQ VDEPRAEKPE DTAAQQDLFS TDSRGRQLQG WNNKLIWGDN KLILSSLKNG PLRQEIERHG GLKLIYIDPP FDVGADFSMD IEIGDDTFTK KPNILEEIAY RDTWGRGADS FIAMIYERLI LCRDLLADEG SIFVHCDWRV NWAIRSVMNE IFGANFFRNE IIWHYENKLG TGWGAKTFDT RHDVLLRFSK GKKYVHNEIA EKVKVEKMQP VTKKVEGERI WLRNDDGSLM YAEGAKERPV GDVWTIPIIN PVATERLNYP TQKPEKLIER IILSGSNEGD LIADFFVGSG TTAAVAEKLG RKWIVSDLGK FAVHTTRKRM IGVQRGLKAE GKDYRAFEIL NLGRYERQHY VGVNPNLREE QRQKQLEEKE TAFLDLILHA YRAERTDGFA SFHGKRAGRL VAVGPVNMPV SRLFVEEIIL ECRKKHITKV DILGFEFEMG LFPNVLDDAR TKGIDISPKY IPADVFDKRA VEKNQVVFHD VSFIEVRPHV KGGSIAVELT DFSVFYSQDS IANAEATLKD KGSKIVVEKG QIIKVSKDKN GIVSREMLTQ NWTDWIDYWS VDFDFENKRE IIRTQNPDTG DWEESWTGDY IFENEWQSFR TKKDRKLELT SVFHECPPGR RKIAVKVVDI FGNDTMTIAE VAVGAQK
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