Gene Smed_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5436 
Symbol 
ID5319738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp393468 
End bp395591 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content51% 
IMG OID640777199 
Productsite-specific DNA-methyltransferase (adenine-specific) 
Protein accessionYP_001314131 
Protein GI150377536 
COG category[L] Replication, recombination and repair 
COG ID[COG2189] Adenine specific DNA methylase Mod 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.81891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGAC TGACAGAACA AGAGCAGCAG GAGATCATTC GTTTTATCGA GGCCGATAAG 
CCGTTGCCCG ACAAGTACCG CTTCCTGCTT TTTAGCGACA AGCGCGAGGT CGAGCTTGTA
TGGAATGGCA AAACCAATGA CGTCTGCAAC GTCGTTCTGC CATTTCAGAC GATAGAGCAG
GTAGACGAGC CGCGAGCGGA AAAACCAGAA GACACAGCCG CACAACAGGA TTTATTTTCG
ACGGACAGCA GGGGGCGGCA GCTTCAAGGT TGGAATAACA AGCTCATCTG GGGCGACAAT
AAGCTCATCC TTTCATCACT AAAGAATGGA CCACTGCGCC AGGAAATCGA ACGGCATGGT
GGCTTGAAGT TGATCTACAT CGATCCGCCC TTCGACGTGG GAGCCGATTT TTCGATGGAT
ATCGAGATTG GCGACGACAC ATTCACAAAG AAACCAAACA TCCTGGAAGA GATCGCGTAT
CGCGATACCT GGGGACGTGG GGCAGACTCG TTTATAGCCA TGATTTACGA GCGCCTCATA
CTCTGTCGTG ATCTGTTAGC AGATGAGGGT AGCATATTCG TTCACTGCGA TTGGCGAGTG
AACTGGGCAA TCCGTAGCGT AATGAATGAA ATATTCGGCG CAAATTTTTT TAGAAACGAG
ATTATCTGGC ACTACGAAAA CAAGCTAGGA ACCGGCTGGG GTGCAAAGAC CTTTGATACC
CGCCACGATG TCCTTCTGCG GTTTTCAAAA GGCAAGAAAT ACGTTCACAA CGAAATTGCA
GAAAAGGTCA AAGTCGAGAA GATGCAGCCT GTCACGAAGA AAGTTGAAGG CGAGCGCATC
TGGCTTAGAA ATGACGATGG AAGCCTAATG TACGCTGAGG GGGCTAAGGA GCGCCCTGTC
GGAGACGTAT GGACCATTCC CATCATCAAT CCAGTTGCCA CGGAGCGATT GAACTATCCA
ACCCAGAAGC CAGAGAAGCT GATAGAAAGA ATCATCCTAT CCGGCAGCAA TGAGGGTGAT
CTTATTGCGG ACTTCTTTGT GGGCTCCGGG ACCACCGCAG CTGTCGCCGA GAAACTTGGC
CGCAAATGGA TCGTCAGCGA TCTCGGAAAG TTTGCCGTAC ACACAACGCG TAAGCGGATG
ATTGGTGTGC AACGAGGATT GAAAGCCGAA GGCAAGGACT ACCGCGCCTT CGAAATTCTC
AATCTGGGGC GTTATGAGCG CCAACACTAT GTTGGTGTGA ACCCGAATTT ACGCGAGGAG
CAGCGTCAGA AGCAGCTGGA GGAAAAGGAA ACTGCCTTTT TGGACCTCAT TCTGCATGCC
TATCGGGCCG AGCGGACGGA CGGTTTCGCC AGTTTCCACG GAAAAAGAGC CGGACGGCTC
GTCGCCGTCG GTCCGGTCAA CATGCCCGTG TCGCGACTGT TTGTAGAAGA AATCATTCTT
GAATGCCGCA AGAAGCATAT CACCAAGGTC GATATTCTCG GCTTCGAGTT TGAGATGGGC
CTGTTTCCAA ATGTGCTGGA CGACGCCCGG ACCAAAGGCA TCGATATTTC CCCGAAATAC
ATACCGGCGG ATGTTTTTGA TAAGCGAGCG GTCGAGAAGA ATCAGGTCGT GTTCCATGAC
GTGTCTTTCA TTGAAGTGAG ACCGCACGTT AAAGGTGGCA GCATCGCTGT CGAACTGACA
GATTTTTCGG TGTTCTATTC CCAGGATTCC ATCGCCAACG CCGAAGCCAC CCTCAAAGAC
AAGGGCAGCA AGATCGTCGT CGAGAAGGGC CAAATTATCA AAGTCAGTAA GGATAAGAAC
GGCATTGTCA GCCGTGAAAT GCTCACGCAG AACTGGACCG ATTGGATTGA TTATTGGTCC
GTGGACTTCG ATTTTGAGAA CAAGCGGGAG ATCATCCGCA CTCAGAATCC CGATACCGGG
GATTGGGAAG AATCATGGAC CGGCGACTAT ATTTTTGAAA ACGAGTGGCA GTCCTTCCGC
ACCAAAAAGG ACCGAAAGTT GGAGCTGACT AGTGTTTTCC ACGAGTGCCC GCCGGGACGG
CGGAAGATCG CGGTTAAGGT CGTGGACATC TTTGGCAATG ACACCATGAC GATTGCCGAA
GTAGCGGTGG GAGCGCAAAA GTAA
 
Protein sequence
MARLTEQEQQ EIIRFIEADK PLPDKYRFLL FSDKREVELV WNGKTNDVCN VVLPFQTIEQ 
VDEPRAEKPE DTAAQQDLFS TDSRGRQLQG WNNKLIWGDN KLILSSLKNG PLRQEIERHG
GLKLIYIDPP FDVGADFSMD IEIGDDTFTK KPNILEEIAY RDTWGRGADS FIAMIYERLI
LCRDLLADEG SIFVHCDWRV NWAIRSVMNE IFGANFFRNE IIWHYENKLG TGWGAKTFDT
RHDVLLRFSK GKKYVHNEIA EKVKVEKMQP VTKKVEGERI WLRNDDGSLM YAEGAKERPV
GDVWTIPIIN PVATERLNYP TQKPEKLIER IILSGSNEGD LIADFFVGSG TTAAVAEKLG
RKWIVSDLGK FAVHTTRKRM IGVQRGLKAE GKDYRAFEIL NLGRYERQHY VGVNPNLREE
QRQKQLEEKE TAFLDLILHA YRAERTDGFA SFHGKRAGRL VAVGPVNMPV SRLFVEEIIL
ECRKKHITKV DILGFEFEMG LFPNVLDDAR TKGIDISPKY IPADVFDKRA VEKNQVVFHD
VSFIEVRPHV KGGSIAVELT DFSVFYSQDS IANAEATLKD KGSKIVVEKG QIIKVSKDKN
GIVSREMLTQ NWTDWIDYWS VDFDFENKRE IIRTQNPDTG DWEESWTGDY IFENEWQSFR
TKKDRKLELT SVFHECPPGR RKIAVKVVDI FGNDTMTIAE VAVGAQK