| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5413 |
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| Symbol | |
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| ID | 5319715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 376615 |
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| End bp | 378288 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777179 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314111 |
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| Protein GI | 150377516 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.5929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAG AACCCTTGAA GACACCCCTG CTTCGGGTGA AGAACCTCGG ACTTCGCCAT
CTCTCGGCGT CCGGACCGGT GACAATCCTG GCCGATGTCA GTTTCGACCT CGGGCGTGGC
GAGATCCTCG GCATCATCGG CGAGTCGGGC GCCGGAAAGT CGACGCTGGG CAATGTCGTC
CTCGGCTTGC TGGCGCCGGA ATTCCAACGG ACATCCGGAA CGATCGAGTT CGACGGCATG
TCGACCGAAG CGATGACGGC AAGCGCGCGG GAGGCAATCC GGGGGCGGCG GATATCGGCG
ATCTTTCAGG ATCATACCGC CTCGCTGGAC CCGCTGATGA GCGTTGGGAT GCAGGTGGAG
GAAACGGTTC TGGCGATCGA CGGTTCTCTT TCGCGACGCC AGGCGCGTCA CCGTGCTCTC
GACCTCCTGA CCCGCGTTGG AATACCGGAC CCGCAGCGGC GATACCGCCA ATACCCGCAT
CAGTTCTCCG GAGGTCAAAG GCAAAGGGTG GTCATCGCCA TCGCGCTGGC CGGATCGCCA
GACGTCGTCA TTGCCGATGA GCCGACATCG GCGCTCGATG CCACGGTTCA AAAGCAGATT
CTCGGGCTCC TTCGAACCCT CGTCGACGAA ACGGGCGTGT CGATCATCCT CGTCACCCAC
GACATGGGCG TCGTCTCGGA AATCACCGAC CGGGTCCTGG TCATGAGAAA GGGCCAGGTG
GTCGAACAGG AGCGCACCGC CGCCATTCTC GACAATCCTT GCCACGACTA CACGCGAAAG
CTGCTTGCCG CGGTTCCAAG GCTGCGCATC CCGGCAACCG CCGCAAACCC GGATGACAGG
CAGAGCCGAA CCGGTGCCAC CGAGGAAGGC GACCGCGAAA CCATGCTTCT CATCGCCAAG
GGTGTTTCGA AACATTTCTC CCAGCGCGTT TTCCCCTGGA GCCGTGCCGG CAGCAAGGCA
AAGTTCGCCT TGCGCGACGT GACCATTCAC CTGCGGCGCG GCACGATCAC CGGGATCGTC
GGCGAGAGTG GAAGCGGAAA GACGACGCTT GGCCGCATCA TCGCGGGGTT GGACAGCGCG
CCGTCGGGCA GGATCACGAT CGGCGGGAGG CAATTCGACG TTGCAAAGAG CGGCCGCCGC
AGCGGTCTTC TCGGCCGCGT GCAGATGATC TTCCAGGATC CCGCCGTGTC GCTCAATCCC
AGGATGACCA TCGGCGAGAC GCTGCGCGAA ACCATCCGGT TTGCGGCCGC GACAGGTCGC
AATGACGCGC CAGCGGATCT GGCTTCAATG ATGGATCGGC TCGGCCTCCC CCGAAGCTTG
CTCACCCGCC ACCCGCATCA ATTGTCGGGC GGCCAGAAGC AACGCGTCTG CATCGCGCGG
ACATTGCTGG CCCGGCCCCA GATCATTGTC GCAGACGAGC CGACCTCGGC CCTGGACGTG
TCGGTACAGG CGGAAATCGT CGACCTTCTG AAAGATACCG TCGCCGAGCG CGACCTGACG
ATGATCTTCA TTTCCCATGA TCTCGCCGTC GTCCAGCAGC TTTGCAGTTC CCTCTACATC
TTCAAGGATG GCCGCGTCGA AGACTTCGGG CCCACCGAGT TCATCTTCTC GCGATCCGAC
AATCCCTACA CCCGCGCCCT CATCAACGCC CGACCCCAGC GGTTCACATG CTGA
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| Protein sequence | MIEEPLKTPL LRVKNLGLRH LSASGPVTIL ADVSFDLGRG EILGIIGESG AGKSTLGNVV
LGLLAPEFQR TSGTIEFDGM STEAMTASAR EAIRGRRISA IFQDHTASLD PLMSVGMQVE
ETVLAIDGSL SRRQARHRAL DLLTRVGIPD PQRRYRQYPH QFSGGQRQRV VIAIALAGSP
DVVIADEPTS ALDATVQKQI LGLLRTLVDE TGVSIILVTH DMGVVSEITD RVLVMRKGQV
VEQERTAAIL DNPCHDYTRK LLAAVPRLRI PATAANPDDR QSRTGATEEG DRETMLLIAK
GVSKHFSQRV FPWSRAGSKA KFALRDVTIH LRRGTITGIV GESGSGKTTL GRIIAGLDSA
PSGRITIGGR QFDVAKSGRR SGLLGRVQMI FQDPAVSLNP RMTIGETLRE TIRFAAATGR
NDAPADLASM MDRLGLPRSL LTRHPHQLSG GQKQRVCIAR TLLARPQIIV ADEPTSALDV
SVQAEIVDLL KDTVAERDLT MIFISHDLAV VQQLCSSLYI FKDGRVEDFG PTEFIFSRSD
NPYTRALINA RPQRFTC
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