Gene Smed_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5402 
Symbol 
ID5319704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp365939 
End bp366163 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content56% 
IMG OID640777169 
ProductXRE family transcriptional regulator 
Protein accessionYP_001314101 
Protein GI150377506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC GGGACATTTT CGCGCTCAAC CTGCGCACGT TGCGACACGC CCGAGGCTAT 
TCGCAAGAAG AATTGGCGGA CCGCGCCAAC ATTCATCGAA CCTATGTCAG CGCACTGGAG
CGATGCCAAT ACAGCGCAAC CATCGATATG GTTGCCAGTC TGGCAAAGGT TCTCGGCGTC
GACGCCGCCG CCCTTCTGAG ATCTAGCCGC GATGGTACCG ATTAG
 
Protein sequence
MNIRDIFALN LRTLRHARGY SQEELADRAN IHRTYVSALE RCQYSATIDM VASLAKVLGV 
DAAALLRSSR DGTD