Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5284 |
Symbol | |
ID | 5319586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 246188 |
End bp | 247180 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777061 |
Product | hypothetical protein |
Protein accession | YP_001313993 |
Protein GI | 150377398 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTC TAAGCTTGAC CCGCCGCGCC GCCATGGCGG CCGGGTTTGC TTTCTGTTCG GCGCTCGCGT TTGGTTCGGC CGCGCAAGCG CAAGACTTTC CGGACCGGAC GGTAACGCTC GTCGTTCCCT TTGCTGCCGG AGGCTCGACC GACGTGGTCG CGCGGATCAT CGCACAGAAA ATGTCCGATG ATCTCGGACA GCAGGTGATC GTCCAGAACG TTGCCGGTGC CGGGGGTAAT CTTGGCGCCG CAAACGTCGC CCGCGCCGAC CCCGACGGCT ATACGATCCT GATGGCGACA GTCGCGACGC ATGCGCTGAA CCCCCTTATC CTGAAAACCA AACCCTATGA TCCCGAGAAG GATTTCGCAC CGATCTCGCT TCTGGTCGTC GTTCCGAACG TCCTGGTGGT CAATCCGGAA CTGCCGGTTA AGACGGTCCA GGAATTGCTT GCGCTCTTGA AAGCTGATCC CGAGAAGTAC GCCTACGCCT CCTCCGGCAA CGGAACGCCG CTTCATCTCT CCGGCGAGCT CTTCAAAAAG ATGGCGGGCG TCGAGATGCA GCACATCCCC TACAAGGGCT CCGGCCCGGC GCTGAATGAC GTAATCGGCA ATCAGGTGCC CATCATGTTC GACAATCTCC CTTCGTCTTC AGGTCATATC AAAGCTGGCA CCCTGCGCGC GCTCGCTGTT ACCACCGCCG AACGCGCATC GTCCTTCCCC GACATTCCGA CCATCGCAGA ATCAGGCATT CCCGGTTACG AGACCTACAC TTGGAATGCA CTCTTCGCTC CGGCCAACAC GCCGCAGCCG GTGATCGCCC GACTGAACGA AGCCGCCAAG AAGGCCATGG CCGATCCCGC CGTGCAGAAA CGCATGGAGG AATTCAGCGC CAAGATCGTG GGCTCGACGC CCGAGGAGCT CGACGCCCAC GTCAAGGCCG AGCTTGCCAA ATGGACCCCC GTCGTCCGCG ACGCCAATAT CCAGATGGAT TGA
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Protein sequence | MAFLSLTRRA AMAAGFAFCS ALAFGSAAQA QDFPDRTVTL VVPFAAGGST DVVARIIAQK MSDDLGQQVI VQNVAGAGGN LGAANVARAD PDGYTILMAT VATHALNPLI LKTKPYDPEK DFAPISLLVV VPNVLVVNPE LPVKTVQELL ALLKADPEKY AYASSGNGTP LHLSGELFKK MAGVEMQHIP YKGSGPALND VIGNQVPIMF DNLPSSSGHI KAGTLRALAV TTAERASSFP DIPTIAESGI PGYETYTWNA LFAPANTPQP VIARLNEAAK KAMADPAVQK RMEEFSAKIV GSTPEELDAH VKAELAKWTP VVRDANIQMD
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