Gene Smed_5283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5283 
Symbol 
ID5319585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp245012 
End bp245932 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content59% 
IMG OID640777060 
Producthypothetical protein 
Protein accessionYP_001313992 
Protein GI150377397 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.193037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT CAGCAGGCGA GAACGAACAG TTCGACTGGC TCGAAGCGGA ACTGGCCGAC 
ACGATCGACG AGGACTACGA ACTCGAGCTT TCCGAACCCG CGCTGTCGGA GGAAATTCGC
AAGATCTACC GCAAGTCCCA TCCTCCGACG CTCCCGCGTA TGGAATACTT CCGCGCGCTA
CTGGCTCTGC AGGCCGAACT CATCAGGTTG CAGGACTGGG TCGTCTATCA CAAAGAGAAG
GTTGTCGTGA TTTTCGAGGG CCGGGATGCT GCCGGCAAGG GTGGCGTCAT CAAGCGCATC
ACCCAGCGGC TGAACCCACG CGTCGTCAGA ACCGTGGCGC TGCCGGCACC ATCCGACCGC
GAGAAGACCC AATGGTACTT CCAGCGTTAT GTGCCGCATC TGCCTGCCGG CGGCGAAATC
GTCCTCTTCG ACCGCTCCTG GTACAACCGT TCCGGCGTCG AGCGTGTCAT GGGTTTCGCG
ACCGAAGAGG AAGTCGAGCA GTTCTTCAAC GATGTGCCCG AGTTCGAGCG CATGCTGGTG
CGCTCCGGCG TTAGGCTCGT CAAGTACTGG TTCTCGATCA CCGACGCAGA GCAGCAGTTG
CGCTTTCTGA TGCGCATCCA CGATCCCCTG AAACAGTGGA AGCTTTCGCC GATGGATCTG
CAATCGCGTG TGCGCTGGGA AGCCTATACC AAGGCCAAGG AAGAAACCTT CGCCCGTACC
AACATAGCTG AGGCGCCGTG GCATATCGTC GAGGCCAACG ACAAGAAACG AGCGCGGCTC
AACTGCATCG ACCATCTCTT GAAGCAGATC CCCTATGCGG ATGTGCCGCA GGAAGACATC
AGCCTGCCGG AGCGGATATT CAATCCGAAT TACGAGCGGG AGGTGCTTCC GCCGGAACTC
TACGTCCCGT CGAAGTATTG A
 
Protein sequence
MMKSAGENEQ FDWLEAELAD TIDEDYELEL SEPALSEEIR KIYRKSHPPT LPRMEYFRAL 
LALQAELIRL QDWVVYHKEK VVVIFEGRDA AGKGGVIKRI TQRLNPRVVR TVALPAPSDR
EKTQWYFQRY VPHLPAGGEI VLFDRSWYNR SGVERVMGFA TEEEVEQFFN DVPEFERMLV
RSGVRLVKYW FSITDAEQQL RFLMRIHDPL KQWKLSPMDL QSRVRWEAYT KAKEETFART
NIAEAPWHIV EANDKKRARL NCIDHLLKQI PYADVPQEDI SLPERIFNPN YEREVLPPEL
YVPSKY