Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5201 |
Symbol | |
ID | 5319503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 160124 |
End bp | 161521 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776979 |
Product | hypothetical protein |
Protein accession | YP_001313911 |
Protein GI | 150377316 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAGAG GGACGACCCT TGCACTTGCG GGCGCAATAA CGCTCATGCT GTCGATGCAA GTCAACGGCT CGCTTGCACA AGAACCCATG AAAGCTGAAA CCGGTACCGC GGCAACAACC CCGGAGCCGT TGACTGACGA CGAACTGGAG GTGCTGGTGG CGCGGATTGC GCTCTACCCG GACGAACTGG TCGCGCTGAT TTCAGCCGTA TCGCTATACC CCTTACAGAT CGTCGAGGCG GACCGGTTTC TTGAGAACCA CAAAAAGAAG CCCGACCTGA AGCCGAAGGA AGGCTGGGAT GGCAGCGTAA TTTCGCTGCT GAACTATCCA GACGTCGTCA AGATGATGAG TGACGATCTT GAATGGACGC AGGCCCTCGG TCAGGCGGTC GCCTATCAGC AGAAGGACGT GCTGATCGCG ATCCAGCAGT TGCGCGACGA GGCGGTAGCC AAGGACATTA TCAAATCTGA CGACAAGATG ACGGTGGTCC AGGAGGGGGA CAACATCATC ATCCAGTCGG CAAATCCGGA GACTATCTAC GTGCCGCAAT ATCCTCCGGA AATGCTGTAC GAGCCGGATT ACGCGCCGGT GCCCATCGAC TACTATGACA CGCCCTATCC CTCCTATTAT TACCCGGGCG CAGCCTTTTT TGCCGGAGCA GTCACCGGTG CGGTCTTTGG CGCTATCGTC GACTGGGACG ACTGGGGGGT CTGGGGCGGA GACTGGGGCG GCGACATTGA TGTGGACTGC GACAATTGCT TCAACAACGT CGATATAGAC GGCAAGGTCA AGTGGAACGA CATCGATTGG AAAAACGTCG ACCGCAGCAA GCTGAAGTTC GATCGCGACC AGCTCCAGAA GTTGGACAGG ACGAACTTGA AAAACAATAT CAAGGCGAAC GGCGACAACA ACATTCGTAA CCGCGCCACC GAGATCAATC GCGATCGGTT GAAGTCGGGA CCGGGCGGTG GCGCTAGCCA ACTAAAGGAC GTTCGCAAGA GCACGCTCGA GGGGCTGAAG GCGCAGCCGA GACGGGACGC CTCCGCGCGT CCAACCGCAA AGCCCGGCGG CGGACAGGCG GTGGCAAAGG CGAAGTCCAA GGGCGCAAAA GCCGGTGTCA ACCGCCCCAA GGGTAAGAAG TCCTCGGCCA ATCGGCCGGC AGGCAAGAAG AAGATGGCTT CGAAGGCGCA GAACAGGTCG AAAAAACCGT CTGGGCTAGG CAACGTTAAC TCCGGCCGGC GGGAGGTGTC TGCCTCACGG CGCGGCGGCC ACAGCATGGG CGGCGGGCAA CGAGGCGGCG GGCGGCCGCA GATGAGTCGC GGCGGCAGCC GGCCGCCGAT GGGGGGACGT GGCGGTGGCG GACGCGGGGG TGGCGGACGC GGGGGTGGCA GGCGCTGA
|
Protein sequence | MIRGTTLALA GAITLMLSMQ VNGSLAQEPM KAETGTAATT PEPLTDDELE VLVARIALYP DELVALISAV SLYPLQIVEA DRFLENHKKK PDLKPKEGWD GSVISLLNYP DVVKMMSDDL EWTQALGQAV AYQQKDVLIA IQQLRDEAVA KDIIKSDDKM TVVQEGDNII IQSANPETIY VPQYPPEMLY EPDYAPVPID YYDTPYPSYY YPGAAFFAGA VTGAVFGAIV DWDDWGVWGG DWGGDIDVDC DNCFNNVDID GKVKWNDIDW KNVDRSKLKF DRDQLQKLDR TNLKNNIKAN GDNNIRNRAT EINRDRLKSG PGGGASQLKD VRKSTLEGLK AQPRRDASAR PTAKPGGGQA VAKAKSKGAK AGVNRPKGKK SSANRPAGKK KMASKAQNRS KKPSGLGNVN SGRREVSASR RGGHSMGGGQ RGGGRPQMSR GGSRPPMGGR GGGGRGGGGR GGGRR
|
| |