Gene Smed_5181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5181 
Symbol 
ID5319483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp136917 
End bp137372 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content65% 
IMG OID640776959 
Productnitrate reductase cytochrome c-type subunit (NapB) 
Protein accessionYP_001313891 
Protein GI150377296 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.458682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGGAA GCCTGTTGGC GGTCCTGCTC GTCGCAACCG GGGCGATCGC CCAGATGGCG 
GGTGAGAGGG TGCCGGAGCT CTCCGGCCCA CCGACGGAGA TGGGCGAGGT AGTGGCGGAG
CCTATTCCGA AGTGGGTCGT GGACGACGCG CGCAAGGAGC GCGCCTATCC CGACCAGCCG
CCAGTCATCC CGCATTCGAT CGAGGGCTAC CAACTTTCGG TCAACACCAA TCGATGTCTT
TCCTGCCATA AGCGCGAACT GACGCAGGAG TCCGGCGCGC CGATGATCAG CGTCACCCAT
TACATGACGC GGGAGGGGCA GATGCTCGCC GACGTTTCAC CGCGGCGTTA TTTCTGCACG
GCCTGCCATG TGCCGCAGGC CGACGTGCGA CCGCTCGTGG GCAATACCTT CCGCGACATG
AGCGAGATGG GCGTCGGTCA CGCGGGGAGC GAGTAG
 
Protein sequence
MLGSLLAVLL VATGAIAQMA GERVPELSGP PTEMGEVVAE PIPKWVVDDA RKERAYPDQP 
PVIPHSIEGY QLSVNTNRCL SCHKRELTQE SGAPMISVTH YMTREGQMLA DVSPRRYFCT
ACHVPQADVR PLVGNTFRDM SEMGVGHAGS E