| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5172 |
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| Symbol | |
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| ID | 5319474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 125869 |
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| End bp | 127419 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776950 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_001313882 |
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| Protein GI | 150377287 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.484438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.743168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TTATTGGAAC GCGTGCGGGC GATATTCTGA GTGGTACAAG CGAAGGCGAC
CGGATCTGGA GTCTCGACGG CAATGATGTC GTGGATGGCG GCAAAGGCGA TGACTTCGTC
GATGGTAGGG CCGGCGACGA TGCGCTGACA AGTTCAAGCG GCTTTGACGA GTTTACCGGC
GGCGAAGGCA ATGATCGGCT GTCGTTCATC GGCGTCGGCG GCGCGGCACG GGGTGGCACG
GGGGTCGACA CGCTTGTGGG CGATTACGCC GCAATAACCG ATGCCTTCCT GTTCGATGGC
ATGAATGGCC ACGCAGCCTT CGGCGATCTT TCGGTTAAAG CAAACCACCT TTATTTCCTC
GATATCGAGC GACTCAATCT GACGACCGGG ATCGGCGATG ACAGAATCAT TGCCACGGGC
TTCAGCTTCG TCAACATCCA TACCGGTGCG GGTGACGACC GTATCGAAAC CGGCATCGGC
GATGACCAGA TCTATGCCGG CGACGGTCGG GATCTACTGT TTGGCGGCGC AGGCGACGAT
TTTATTAGCG GCGGTCAGGG CGACGACTAC GTTAACGGCG GCAACGACGA CGACAGGCTC
GAGGGGGAGG ACGGCAATGA CAGTCTTGTG GGCGGTCGTG GCAACGACCG GCTCGATGGC
GGCAGCGGCG ATGACGACGT CAATGGCGGG GACGGCAACG ACTCTCTGAC CGGAGGCCTT
GGATCGGATA CGGTTACGGG CGGTGCCGGG GATGATTACC TGAGCAACGG TTTTGCCGCC
GGAGACATAC TGCTCGGCGG CGACGGCAAT GACACTCTCT CGGCGGGTGG GGAAGACACC
GCCTATGGCG GATGGAGTGA GCTCTATGGC GGCGCCGGCG ATGACAGACT TCACGTCTAT
ACGGATGGTA TAATCGGCGC ATTGGACGGC GGCGATGGTT TCGACAGAGC GAGCATCGCA
CTCGATGATG TGCCCGCCGG CTTCGTTCTC GATGCATCGC GTTTTGGCTC GATCGAGGAG
TTCAACATCA CCGTTAAATC GGCCTATCTT GGCGTCCACC TCTCCGGCGG GAATGGCAAC
GATAGGCTCT TCTGTTTCGA CACCTACAGG GAAGGCCCCA GCGGAAACGA TGTTTTGAAC
GGGCGCAGCG GCGATGACAT ACTCGTCGGC GGCAGTGGAG CGGATAGTCT GCTTGGCGGG
GATGGCAACG ATTCGCTGAG TGGCGAATAT CACTCGGACA GGCTGCTCGG CGGTGCTGGC
GCCGATCTTT TGACAGGTGG ATCCGACGCC GACACTTTCA TTTGGGACGA AGCCTCTGTC
CGCAATGACA GCAGCATCGA TCGGATCATC GACTTTCGCA GCGGGGACGG TGATGTGCTT
CTATTCCGCG GCTTTGGCGG TACCGAGTTT CGCGACTTCG AAAGCTTCCT CGCCGCCTCC
CGTGATACGC CCGAAGGGGT TTACGTCAGT TTCGATGGCG ACGCCCACGG GATATTGATC
CAGAATACCC TGCTCGCTGG TTTTTCGGCC GCAGACGTCC TCTTCGCCTG A
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| Protein sequence | MAKFIGTRAG DILSGTSEGD RIWSLDGNDV VDGGKGDDFV DGRAGDDALT SSSGFDEFTG
GEGNDRLSFI GVGGAARGGT GVDTLVGDYA AITDAFLFDG MNGHAAFGDL SVKANHLYFL
DIERLNLTTG IGDDRIIATG FSFVNIHTGA GDDRIETGIG DDQIYAGDGR DLLFGGAGDD
FISGGQGDDY VNGGNDDDRL EGEDGNDSLV GGRGNDRLDG GSGDDDVNGG DGNDSLTGGL
GSDTVTGGAG DDYLSNGFAA GDILLGGDGN DTLSAGGEDT AYGGWSELYG GAGDDRLHVY
TDGIIGALDG GDGFDRASIA LDDVPAGFVL DASRFGSIEE FNITVKSAYL GVHLSGGNGN
DRLFCFDTYR EGPSGNDVLN GRSGDDILVG GSGADSLLGG DGNDSLSGEY HSDRLLGGAG
ADLLTGGSDA DTFIWDEASV RNDSSIDRII DFRSGDGDVL LFRGFGGTEF RDFESFLAAS
RDTPEGVYVS FDGDAHGILI QNTLLAGFSA ADVLFA
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