| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5143 |
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| Symbol | |
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| ID | 5319445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 95734 |
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| End bp | 96276 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776921 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001313853 |
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| Protein GI | 150377258 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.387385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATG CGGTGAAGGA TATCGGTGAA CGCCTCATGG CGTTCCTGCC CAATCTGCGC
CGCTTCGCCA TCTCGCTCTG CGGCTCGCGT GATGTGGCCG ATGATCTTGT GCAGGCAGCT
TGCGAGCGGG CACTTGCGAG TGCCGAGCGC TTCGAGCCGG GTACGCGTTT CGACGCGTGG
ATGTTCCGGA TTCTACGCAA CCTTTGGGTC GATCAGGTGC GCCGGCAGAG GACCGCAGGC
GTGCAGGACG ATATTTCCGA ACGCCATGAC ATTGCCGGTT CATCCGGCGA GCGGGAGGCC
GAAGCGCGGC TGACCCTCAA GACCGTTGCG GAGGCGATCA CCGAATTGCC GCAAGAGCAG
CGGGAGGTGC TGCTTCTGGT CTGCGTCGAG GAGCTATCCT ACCGCGAAGC CGCCGAAGTA
ATGGGCATTC CGATCGGAAC GGTGATGAGC CGCCTGGCCA GAGCGCGGAA AAGTTTGGCC
GAGGCCGCCG GAATAACGAT GACCGCCGCA CGTTCGCATG TGATGAAGGG CGTAAAAGAA
TGA
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| Protein sequence | MSNAVKDIGE RLMAFLPNLR RFAISLCGSR DVADDLVQAA CERALASAER FEPGTRFDAW
MFRILRNLWV DQVRRQRTAG VQDDISERHD IAGSSGEREA EARLTLKTVA EAITELPQEQ
REVLLLVCVE ELSYREAAEV MGIPIGTVMS RLARARKSLA EAAGITMTAA RSHVMKGVKE
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