Gene Smed_5124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5124 
Symbol 
ID5319426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp78055 
End bp78480 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID640776902 
ProductTadE family protein 
Protein accessionYP_001313834 
Protein GI150377239 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0349202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAT CGGGCGGCAG AATTCGCAGC CTGCGGCGCA ATCAATCCGG CGCAACGGCG 
GTGGAGTTTG CGCTCGTGTG CCTGCCTTTG CTGCTGCTCG TCATCGGCGT CATCGAGTTC
GGCCGCGCCT TTTATGTGCG CAATGAGCTG TCGCACGCCG CCGACGTCGC CGCCCGGCGC
GTGCTTATCG GCCAGATCGC ACACAACGCC TCCGACAGCG AAGCACAGGC CAAGCTGGAC
AGCGCAGTGC GCGAGAGCTT TCGCAGCGGC GATCCGACGC TGCTCACGAT CGCCGTCAGC
AAGGAAACGG TGGACGGAAT AGCTTTCCGG GTGCTGTCGA TCCGTTACCC GTTCACCTTT
GTCCTCCCCG GTCTCGCCCA GAGCAGGATC AGCCTCAATC TGTCTCGGCG CATCCCGATC
GGGTGA
 
Protein sequence
MTASGGRIRS LRRNQSGATA VEFALVCLPL LLLVIGVIEF GRAFYVRNEL SHAADVAARR 
VLIGQIAHNA SDSEAQAKLD SAVRESFRSG DPTLLTIAVS KETVDGIAFR VLSIRYPFTF
VLPGLAQSRI SLNLSRRIPI G