Gene Smed_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5100 
Symbol 
ID5319402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp47887 
End bp48276 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID640776878 
Producthypothetical protein 
Protein accessionYP_001313810 
Protein GI150377215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.152426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.477551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG CTCAAAAGCT TCAAAGCGGC GGCGGACCGC TGATACTGTC CTATATGGAC 
AAGGGCGGAA AGATCGCGGT TCAGCAGGTC GCGGACGGCT TCGGCATGTC GAAAACGCAA
CTGGCCGAAA CGGCCGGGCT TGCCCGCGAA ACGCTTTATA GACTGGAGCG CAGCCGGGGG
ACGAAGACGC AGAACCGCCT TCGCGAAATG CTTGAGATCA TCAGCCGGGT CGCCGATTGG
GCGGGCGGCA AGGAGCAGGC AATGGCTTGG TATCGCGCCC AGCCTCTCCC CGCTTTTGGC
GGTCGAACGG CCGAAGCTCT GGTAAAGGAC GGCAAGGCGG CGGCCGTGCG TGACTATCTC
GATCACATGG CCCTCGGGGG CTTTGCGTGA
 
Protein sequence
MAQAQKLQSG GGPLILSYMD KGGKIAVQQV ADGFGMSKTQ LAETAGLARE TLYRLERSRG 
TKTQNRLREM LEIISRVADW AGGKEQAMAW YRAQPLPAFG GRTAEALVKD GKAAAVRDYL
DHMALGGFA