Gene Smed_5085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5085 
Symbol 
ID5319387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp33928 
End bp34677 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID640776864 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001313796 
Protein GI150377201 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG TCGTCGTTTC TACCGTCGAA GGGCCGATCG CCTGGGTGAA GCTGAACAGG 
CCGGAACGGC TGAACGCCAT GAACGGAACC CTGGTAGCCG GGCTCTCCGA GGCGCTCGAG
GGCGCTGAGG CCGACGAGAA CATACGCGTC GTCATTCTTC ACGGCGAGGG CAGGGCATTC
TGTTCCGGAG ACGACCTCAA GGATCTCGAT GCGCAGACGG CTTGCGAGGC CGATACGCAA
GCCTGGGTGG AGGCCATCCA GAACATCACG ATCCAGATCA TGCAGTCGCG CAAGATCGTC
ATTGCCGCGG TGCATGGCTG GTGCGTCGGC GGCGCGCTGG AATGGGCGAT CAATTGCGAT
TTCCGGCTGT TCTCCGAGAA TACGCGCTGG TTTTTCCCAG AAGTGACCTA CGGCCTGTTC
GTGACGGGTG GCGTCACCGC TCTTTTGACG AAGCAGGTCG GCCCGCAGGT CACGAAGGAG
CTTCTCATCC TCGGCGAGCG CCACGATGCG AAAAAAGCGC TGGAAACCGG CATTGCCTGG
AAAGTCGTGC CGGACGACAG CCTTCTCGAC GAAGCCCGGC AATTGGCACT AACGATTGCG
AAACGTCCCT CCGTCGCGGT TGCAGACGTC AAGCGTGCCA TCAATGAAGG CCTTCACTCA
TCCCTCGAAG ACGCAATGGC GCAGGAGACG GCAGCCACGG TTCGCGGCTT CCTCACTCCC
GAGGCGCAGG CAAGGGCGAA AGAGTTCTGA
 
Protein sequence
MSNVVVSTVE GPIAWVKLNR PERLNAMNGT LVAGLSEALE GAEADENIRV VILHGEGRAF 
CSGDDLKDLD AQTACEADTQ AWVEAIQNIT IQIMQSRKIV IAAVHGWCVG GALEWAINCD
FRLFSENTRW FFPEVTYGLF VTGGVTALLT KQVGPQVTKE LLILGERHDA KKALETGIAW
KVVPDDSLLD EARQLALTIA KRPSVAVADV KRAINEGLHS SLEDAMAQET AATVRGFLTP
EAQARAKEF