| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5068 |
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| Symbol | |
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| ID | 5319370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 14889 |
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| End bp | 16310 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776848 |
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| Product | amidase |
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| Protein accession | YP_001313780 |
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| Protein GI | 150377185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.408041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGC TTGAAACCTT GCCGATAAGG AAACTTGCTG CGATGGTTCG GTCGCGGAAG
ATCTCCGCTG TCGAAGTGAC AAGCTATTTC CTTAACCGGA TCATGGCCTT CGATGATGCA
ATCTGCGGGT TCAACGTACC GGCACCCGAG ACAGCGATGG GGGCCGCGCG CGACCTGGAC
AAGCAACTTG CTGCCGGAGG AGAGGCGGGC GCCCTTGCCG GCATTCCGCT CTCGATCAAA
GATATAGCCG ATGTCGCCGG CCTTCCCTCC GCGGGGGCCT CGGCGTCGCG GGCAGGGCGC
ATGGCCTCAA CCGATGCGAC CGTCGTCGCC CGCATGAAGA TTGCAGGCGG AATTGCGCTC
GGCAAGGCCA ACTGCCATGA GCTTGCTTTC GGCGGCCCGT CCTTCGATCT GCCTTATCCG
CCGGCCCGCA ACCCTTGGAA TCGCGACCGC TTTCCCGGTG GATCGTCGAG CGGGTCCGGC
GTCACGGTGG CGGCCGGTCT CTGTCTTGGA TCGCTGGCGA CCGACACGGC CGGTTCGATC
CGGCTTCCGG CAACTATGTG CGGCGTCTTC GGCCTGAAGC CCGGTCGCGA CACGCTGCCG
CTCGACGGCA TCGCCGTACT TGCGGCCACG ATGGACCACG TCGGGCCGGT CGCCCGGACC
GCCGACGATA CCCGCATCCT CTTCGACGTC ATGGCAGGGC GCAGCCCTGG CCCACCGTGC
TCGGGGTCCC TGCACGGTTT GCGGATCGGT GTCCCGTCGG ATGATTGGGG TGTTGGATCA
CTGATGCATC CGGATGTGCA GACGGGCCTT GAGAGCGCCA TCGACGTCGC CCGGTCGGAA
GGCGCGGAGA TCGTTCCACT CGAGCTTCCT TCGCTGGACG ACTTTCATGC CCCGGCCACC
ATCCTCATGA TGGCCGAGAT TGCTGCAGAA CATGCCGCTT CCGTCCGTGC GGCCTGGGAC
AAGTTCGGCG CGATATTCCG TGCTCGCGCC CTTGTCGGCG AAGGGATAAC GGCCGAAGAC
TACCGGCTTG CCGAACGTCT GCGCCCTGTT CTGACGCGGC GGCTCTTCGA TGCTATCTCA
AGCGTCGATT GCCTGCTGGT CGCCGGCGCG CTCGCGCCAC CGGGACCGCT TGCGTCGGTC
GATTCCTTCT ATTTCATGAA GGAGCCAATT CCGAATATCG TTGCCAATTA TACCGGTTTT
CCCGCTCTCG CCTTTCCGGC CGGTGTTTCG AGCGAAGGGA TGCCGATTGG TGTGCAGATC
ATGGGCGTGC CGGGCTCGGA GCATCGGCTG CTCGACATTG CCGAGAATTA CGAGAGGGCG
GATCCATCGC GTTTTGCGGC TGGAACTCCT CCGGACTTCG GAAACGCCGC AAGCCTTGCC
TTTCCAACGG GGAGCGCCCC GATAGAACCA TGTGAAACCT GA
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| Protein sequence | MTVLETLPIR KLAAMVRSRK ISAVEVTSYF LNRIMAFDDA ICGFNVPAPE TAMGAARDLD
KQLAAGGEAG ALAGIPLSIK DIADVAGLPS AGASASRAGR MASTDATVVA RMKIAGGIAL
GKANCHELAF GGPSFDLPYP PARNPWNRDR FPGGSSSGSG VTVAAGLCLG SLATDTAGSI
RLPATMCGVF GLKPGRDTLP LDGIAVLAAT MDHVGPVART ADDTRILFDV MAGRSPGPPC
SGSLHGLRIG VPSDDWGVGS LMHPDVQTGL ESAIDVARSE GAEIVPLELP SLDDFHAPAT
ILMMAEIAAE HAASVRAAWD KFGAIFRARA LVGEGITAED YRLAERLRPV LTRRLFDAIS
SVDCLLVAGA LAPPGPLASV DSFYFMKEPI PNIVANYTGF PALAFPAGVS SEGMPIGVQI
MGVPGSEHRL LDIAENYERA DPSRFAAGTP PDFGNAASLA FPTGSAPIEP CET
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