Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5042 |
Symbol | |
ID | 5319091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1563228 |
End bp | 1564472 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776823 |
Product | peptidase T |
Protein accession | YP_001313755 |
Protein GI | 150377159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.918686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACGC GCGACGAGCT GGTCAGCCGG TTTTTCCGGT ACGTGGCCAT TGAGAGCCAG AGTAACGGTC ACTCTGCGTC CCTGCCCTCC TCCCCCGGCC AGTTCGAGCT TGCCTCCTTG CTGGCCGAGG AGTTGCGGAT GCTCGGGATC GAGGACGTCG TGCTCGATCA GCAGGCGATT GTGACCGGCG TGAAGCGTGG CACCAGGCCC AATGCGCCAA GGATCGGGTT CATCGCGCAT CTCGATACGG TCGATGTCGG CCTTTCTGCC ATTATCCGGC CGCAAATTCT CCGGTTCGAA GGCACGGACC TTTGCCTCAA CCCTCAGGAG GACATCTGGC TGCGCGTTGC CGAACACCCG GAACTCCTCG CCTGGTCGGG GGAAGACATC ATCGTCAGCG ACGGCACCAG CGTGCTCGGA GCGGACAACA AGGCGGCGAT CGCGGTCATC ATGACACTTC TCGCCCGGCT CGATGCGCAA GGCGCCCACG GCGACGTCTT CGTCGCCTTC GTGCCGGACG AGGAAATCGG TCTGCGCGGC GCCAAGGCGC TCGATCTGGC GCGCTTTGCA TGTGACTTCG CCTACACGAT CGATTGTTGC GAGCTCGGCG AAGTCGTGCT CGAGACCTTC AACGCCGCAT CGGCTGAAAT CATCTTTACC GGCGTCAGCG CGCACCCGAT GGCCGCAAAG GGCACCCTCG TGAACCCCCT TTTGATGGCG CTGGACTTCG TCTCGCACTT TGATCGCAAG GATACACCTG AATGCACGCA GGATCGGCAA GGGTTCTTCT GGTTCAAAGA GCTTGTTGCG CATGACAGCA AGGCAACACT CAACGTGCTG GTTCGCGACT TCGATGCGGC AGAATTCGAA CGGCGCAAGC AGCAGCTCCT TGCCATAACG GCGCTGGTCA ACGCGCACTA TCCCTCCGGC CGCGTCGAGT GCCGGTTGAC CGACACCTAC CACAATATCG GCCGCCGCCT GCGCGACGAC AGCCGCCCGG GAACGCTGTT GTTCCAGGCT TTCGACGCGC TCGGGATTGA ACAAAAGCGC ATTCCGATGC GCGGCGGCAC CGATGGCGCC GTCCTCTCGG CCCGGGGAAT ACCGACGCCG AACTTCTTCA CCGGCGCCTA CAACTTCCAT TCCCGATTTG AATTCCTGCC GGTCTCAGCT TTCGAAAAGT CGTTCGAGGT TGCAGCCATG CTTTGCAAAC TGGCGGCGCA GGATGAGGCG TTGGCCGACC GCTAA
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Protein sequence | MRTRDELVSR FFRYVAIESQ SNGHSASLPS SPGQFELASL LAEELRMLGI EDVVLDQQAI VTGVKRGTRP NAPRIGFIAH LDTVDVGLSA IIRPQILRFE GTDLCLNPQE DIWLRVAEHP ELLAWSGEDI IVSDGTSVLG ADNKAAIAVI MTLLARLDAQ GAHGDVFVAF VPDEEIGLRG AKALDLARFA CDFAYTIDCC ELGEVVLETF NAASAEIIFT GVSAHPMAAK GTLVNPLLMA LDFVSHFDRK DTPECTQDRQ GFFWFKELVA HDSKATLNVL VRDFDAAEFE RRKQQLLAIT ALVNAHYPSG RVECRLTDTY HNIGRRLRDD SRPGTLLFQA FDALGIEQKR IPMRGGTDGA VLSARGIPTP NFFTGAYNFH SRFEFLPVSA FEKSFEVAAM LCKLAAQDEA LADR
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