| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4970 |
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| Symbol | |
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| ID | 5318033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1484747 |
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| End bp | 1485592 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776752 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001313684 |
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| Protein GI | 150377088 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0811524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC TTCGTTATGG CGAACCGGGC CAGGAAAAGC CGGGTCTTCT CGGTTCCGAC
GGCATCATCC GCGATCTTTC CGGCCAGGTG CCCGATCTCG CCGCCGGCGC CCTCGATCCG
AGCAAGCTCA CCGAACTGGC GAAGCTCGAT GTCGAGGCGC TGCCTGCCGT CAACGGTAAT
CCGAGACTCG GACCCTGCGT CGCAGGCACC GGCAAGTTCA TCTGCATCGG TCTCAACTAT
TCCGACCACG CCGCCGAAAC CGGCGCGACC GTTCCGCCGG AACCGATTAT TTTCATGAAG
GCCACCTCGG CTATCGTCGG GCCGAACGAC GACCTGATCC TGCCGCGCGG TTCGGAAAAG
ACCGACTGGG AAGTGGAACT CGGCATCGTC ATCGGCAGGA CGGCGAAATA TGTGAGCGAA
GCAGAGGCAC TCGATTATGT CGCCGGCTAT TGCACCGTTC ACGACGTTTC GGAACGCGCA
TTCCAGACCG AGCGTCATGG TCAATGGACG AAGGGCAAGT CCTGCGACAC CTTTGGGCCC
ACCGGACCGT GGCTCGTAAC CAAGGACGAG GTCGAGGACC CGCAAAACCT CGCAATGTGG
CTGAAGGTCA ATGGCGAGAC GATGCAGGAC GGCTCGACGA AGACGATGGT CTACGGCGTC
GCCTATCTCG TCTCCTACCT CTCCCAGTTC ATGTCGCTGC ACCCTGGTGA CGTCATTTCC
ACCGGCACGC CGCCGGGCGT CGGCATGGGC ATGAAGCCAC CGCGCTATCT GAAGGCAGGC
GACGTGGTAG AGCTCGGCAT CGAGGGCCTC GGCAGCCAGA AACAACGCGT ACGCGCGGAC
GACTGA
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| Protein sequence | MKFLRYGEPG QEKPGLLGSD GIIRDLSGQV PDLAAGALDP SKLTELAKLD VEALPAVNGN
PRLGPCVAGT GKFICIGLNY SDHAAETGAT VPPEPIIFMK ATSAIVGPND DLILPRGSEK
TDWEVELGIV IGRTAKYVSE AEALDYVAGY CTVHDVSERA FQTERHGQWT KGKSCDTFGP
TGPWLVTKDE VEDPQNLAMW LKVNGETMQD GSTKTMVYGV AYLVSYLSQF MSLHPGDVIS
TGTPPGVGMG MKPPRYLKAG DVVELGIEGL GSQKQRVRAD D
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