Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4968 |
Symbol | |
ID | 5318031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1481710 |
End bp | 1482687 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776750 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_001313682 |
Protein GI | 150377086 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.565249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0876264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCC TGATCGCTGC GGCCGCAATG GCTGCCCTGT CGTTCTGCGG CATTGCCAGT GCGCAGGAAT ACAGCCTGCG GTTCTCGACC TCGCAGGTGA ATCCGAACGA GCCGATCATC AAAGCGATGA AGACTTACGC CGAGCGTGTT GGTGAACGCT CCGGCGGGCG AATCGCGATC ACCGTGATGA CGGGTGATCA GCTTGGTGCG CAAAAGAAGG TCAACGAGAT GGTCATGAGC GGCGCGAGTC TGCTCAGTGC CACCGACTAT GGTCAGCTTG GCCAGTTCGT TCCGGATCTG TCTATCCTTG CCGGTCCCTA TGTCTATCCG GATCTGGCCG CGACGGAGCG CCTCTTCGCA TCGGATCTCT ACAAGGAACT TTCCGGCAAG CTGGAAGCGC GTGGTATCAA GATCATCATG CCGAACGGCC TCTTCGGCTA CCGTCACATC ATTTCCAACA AGCCGGTTCG CTCGCCGGCT GATCTCGCCG GCGTGACCAT TCGCGTACCC TCGTCGCCGA TCATGATGGC GACCTTCGGC AACTACGGCG CAAGGCCGAC GGAATTGCCG TGGGGGGACG TCTACAATGC GCTTCAGACC GGCGTCGTCG ACGCAGCCGA AGGGCCTTTC GGCTCAATAG CCGGGGCGAA ATTGAACGAG ACCCGCAAAG TCATTTCGAA GACCGGCCAT CAGATCATGT TCACCGCCTG GGTAGCCTCC AGCCAGTTCT TCAACGGCCT TCCCGAAGAC CTTCAAAAGA TCCTCCTCGA GGAAGGGCGG GCGATCGCCA GTGAATTGAC GCAGATGACA CTGGAAACGG ATGACGCCTA TGCAAAGCAG CTCTCTGCCT CCGGCGTCGA GATCGTGACC GATGTCGACA TTCCGGCTTT CATCGAGGCC TCCCGGGCCG CCTACGACAA GGTTCCGAAT ATAACGCCCG GCATCTACGA GCAGGTACAG AAGGCGATGA AGCAATAA
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Protein sequence | MKTLIAAAAM AALSFCGIAS AQEYSLRFST SQVNPNEPII KAMKTYAERV GERSGGRIAI TVMTGDQLGA QKKVNEMVMS GASLLSATDY GQLGQFVPDL SILAGPYVYP DLAATERLFA SDLYKELSGK LEARGIKIIM PNGLFGYRHI ISNKPVRSPA DLAGVTIRVP SSPIMMATFG NYGARPTELP WGDVYNALQT GVVDAAEGPF GSIAGAKLNE TRKVISKTGH QIMFTAWVAS SQFFNGLPED LQKILLEEGR AIASELTQMT LETDDAYAKQ LSASGVEIVT DVDIPAFIEA SRAAYDKVPN ITPGIYEQVQ KAMKQ
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