Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4959 |
Symbol | |
ID | 5318474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1471511 |
End bp | 1472533 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776741 |
Product | glycosyl transferase family protein |
Protein accession | YP_001313673 |
Protein GI | 150377077 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0171285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC CTCTGAGCAT CCCCGACGTC ACATTCGTCG TTGCCGCCTA CAATTCGGCA GACACGATCA TGCGCGCAAT CGAAAGCGCC CTGTCTCAGG AAGGCGTCAC GGTCGAAGTT ATCGTGGTCG ACGACTGCTC TACGGACGCG ACGCCGGCAC TTGTGGCAGC GATCCGGGAC TTGCGCGTCC GGCTGATCGC GCTCGACCGC AACCGTGGGC CCGGCGGCGC ACGCAACGCC GGTATCGGGG CGGCACGCGG CAAGTGGATC GCGGTTCTCG ATTCGGACGA TACGGTCCGG CCGGACCGGC TCAGGCGCAT GATAGAGCGA GCGGATTCGG CCGGAGCACA GATCGCGGTC GATAATATTG ATGTCGTTTC GCTCGGCGGG GGCAGTCTCA GGATGTTCCC CGAAGCGCAG CTCGCCCGCA TGCCGCAGCT TACACTTCCC GCTTTTATCG GGTCGAACAT ACTCTTTCGA TCCGAGCACA ATTTCGGCTA CATGAAACCG GTCTTCGAGC GCCGCTTCCT CGAAAATCAT GGACTTCGTT TCGACGAGAC GCTCCGCATC GGCGAGGACT ATATCCTGCT TGCATCGGCG CTTGCCTGTG GCGGGCGCTG CGCGGTCGAG CCCTCGGCCG GCTATATCTA TCATATCCGC GAGGGCTCCA TCTCGCGTGT GCTGCGGCTC GAGCATATAG ACGCCATGAT CGCCGCCGAC GAGGCGTTTC TGCAGCGCTT CGCGCTCGAC GCCCAGGCAC AGGAAATGCA GCGCAAACGT ATGCGCGGCT TCCGTCAGGC TCGCTCCTTT CTGGTCCTTG TCGATCAGTT GAAAAAGAGA TCGTTGGCCG GCGCGTTCAA AACCGCACTG GCCGACCCGC TCGCACTCCG GCATCTCGGC ATGCCGATTG CTGCCCGATT GCGCCGCCTT GCCGCGCGAT TGCTGCATCC TCCGTCCCAT GCCCCCATGA CGGCGGTGGA ACGATCGCCG TTGGGCGACG ACCCCCACAC AAGCAAAGGA TGA
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Protein sequence | MSAPLSIPDV TFVVAAYNSA DTIMRAIESA LSQEGVTVEV IVVDDCSTDA TPALVAAIRD LRVRLIALDR NRGPGGARNA GIGAARGKWI AVLDSDDTVR PDRLRRMIER ADSAGAQIAV DNIDVVSLGG GSLRMFPEAQ LARMPQLTLP AFIGSNILFR SEHNFGYMKP VFERRFLENH GLRFDETLRI GEDYILLASA LACGGRCAVE PSAGYIYHIR EGSISRVLRL EHIDAMIAAD EAFLQRFALD AQAQEMQRKR MRGFRQARSF LVLVDQLKKR SLAGAFKTAL ADPLALRHLG MPIAARLRRL AARLLHPPSH APMTAVERSP LGDDPHTSKG
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