Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4943 |
Symbol | |
ID | 5318270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1454765 |
End bp | 1455772 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776726 |
Product | acyltransferase 3 |
Protein accession | YP_001313658 |
Protein GI | 150377062 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.336131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.306637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGACGA TCTACGGCAT ACAATATCTC CGCGCCGCGG CGGCACTCGC CGTTGTTTTC TTCCACGCGG CGGAGAAAAC CGGCCATCAT TTCACGATCG GTGCCGCCGG CGTCGACGTC TTCTTCGTCA TAAGCGGCTT CATCATGTGG GTCATCAGCG ACCGTCGGCC GGTGACACCA CTGGAATTCA TCAGGGATCG TGCGCGCCGC ATCGTGCCGG TCTATTGGCT CGCGACCGCC GTAATGGTCG CGGGGGCGCT GGCGGGTCTG TTTCCCAATC TGGTCCTTAG CCTGGAACAT GTCCTGGCGT CGCTGTTCTT CGTGCCGGCG CGCTCTCCGA GCAGCGGAGA AGTCTGGCCT GTGCTCGTGC AAGGCTGGAC GCTGAATTTC GAGATGCTCT TCTACCTGGT CTTCGCCGGC TCCCTCGTCT TGCCGCGCAA CTGGCGGCTG CCCGCCATGT CCGGCCTTTT CCTGGCGCTT GTCATCGCCG GCCGTGTCGC AACCTTCGAC GGTACGTTGA TGCTGACCTA TACGCGGCCG ATCATTCTTG AGTTCGTCGC CGGCATGATC ATCGCGGAGT TCTGGCTGAA GGGCAGGGTA CCGCCGTTGG CGGTCGGTTC CGCTCTGATG GCCTGCTCGC TCGGCGGCTT CGCTCTCATC GGCTTGCTCG CTCTGCCTTT CGACGAGCTG ATAACCGGAC CGCTTGCCGT GCTGCTCGTC CTCGGCGTCC TTTCGCTGGA GGCGAATGGC TGCGTACGGA GGGTGCCGCT GCCGGCGCTT CTCGGCGACG CCTCCTATTC CATCTATCTC TGGCACACTT TTGCGATATC GGTCGTGGCT AAGGTGGCCC TGGAGATCGA TCTCGGCGCG CCGGCAACGA TGTTCATGGC CGTCCTTTCG GGAACGCTCA TCGGGATTGC GGCATACATG ATGCTCGAGC GCCCGCTGAT GCGGCGGGGC AACGCCCGGC GGGTTGCCGG GGGCCTTGCC GGGCGTGCGG CGGAATAG
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Protein sequence | MKTIYGIQYL RAAAALAVVF FHAAEKTGHH FTIGAAGVDV FFVISGFIMW VISDRRPVTP LEFIRDRARR IVPVYWLATA VMVAGALAGL FPNLVLSLEH VLASLFFVPA RSPSSGEVWP VLVQGWTLNF EMLFYLVFAG SLVLPRNWRL PAMSGLFLAL VIAGRVATFD GTLMLTYTRP IILEFVAGMI IAEFWLKGRV PPLAVGSALM ACSLGGFALI GLLALPFDEL ITGPLAVLLV LGVLSLEANG CVRRVPLPAL LGDASYSIYL WHTFAISVVA KVALEIDLGA PATMFMAVLS GTLIGIAAYM MLERPLMRRG NARRVAGGLA GRAAE
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