Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4938 |
Symbol | |
ID | 5318265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1448988 |
End bp | 1449344 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640776721 |
Product | putative 6-pyruvoyl tetrahydropterin synthase |
Protein accession | YP_001313653 |
Protein GI | 150377057 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein [TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0732019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.41518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGCA TCACCAAGGA ATTCCATTTC TCCGCCTCGC ATCAGTTGAA GAACCTGCCT CCCGAGCATC AATGCGCGCG GCTGCACGGG CACAACTACA TCGTCGAGGT CGAGCTTTCG GGCGAAACGT TGAACGAGCA TGGTTTCGTG CGCGACTATC ACGAGCTTGC GCCTCTGAAG ACGTATATCG ATGAGGCCTT TGACCACCGC CACCTGAACG ACGTGCTCGG GCACGACCGG GTGACGGCGG AATGTCTGGC ACGGCATTTC TACGAATGGT GCAAGGCTCG TCTTTTCGAA ACAACGGCCG TTCGCGTCAG CGAGACGGCA AAGACCTGGG CGGAATACCG GCCATGA
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Protein sequence | MFRITKEFHF SASHQLKNLP PEHQCARLHG HNYIVEVELS GETLNEHGFV RDYHELAPLK TYIDEAFDHR HLNDVLGHDR VTAECLARHF YEWCKARLFE TTAVRVSETA KTWAEYRP
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