| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4873 |
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| Symbol | |
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| ID | 5318920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1377033 |
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| End bp | 1378706 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776658 |
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| Product | Na+cotransporter |
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| Protein accession | YP_001313590 |
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| Protein GI | 150376994 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1283] Na+/phosphate symporter |
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| TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00339774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.833034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCA TTACTCTCTC GCTGCATCTC GCCGGCGCGA CCGTGCTGCT GCTTTACGCC
GTGCATCTCG TCCGTAGCGG CGTCGAGAAC GCCTATGGGC CTTCTCTGAA GCGTGTGCTG
GCGAAAGGAG GGGAGCGCCG CGTTTACGCC GCCGCGAGCG GCACGGCCCT TGCCGTCCTG
TTGCAAAGCT CCACCGCAGT GGCGATGCTT GCCTCCGGCC TTGCCGCAAG CGGCTATCTC
ACGCTGAACA CCAGCCTAGC CGTTCTGCTT GGAGCGGATT TCGGCTCGGC GCTGGTGGTC
CGTGTCCTAT CGTTCGATCT CGGCTGGATG TCGCCGCTGC TGCTTGCGGC CGGTGGGCTT
TGTTACCTGA AGGGAAGAAC CGACAAATTT CACGAAATCG GGCGCATGCT GCTCGGTATC
GCCTTCGTCC TCATGTCGCT GAAGCTGATC GGCGAGGCGA CAGTGCCGTT GAAGAGGAGC
GAAGTGCTGC CTGCTATCGT CGGGTATCTC GCCGAAGACC AGGTGATGTC CTTCGTCGCC
GCGGCGCTCT TCACCTGGAT CGTTCATTCG AGCGTCGCAG TTCTGATCCT CATCCTCGGT
TTCGCCGCAC AGGGACTTCT GCCGATCGAG GCGGGCCTGC CGTTGATCCT CGGAGCGAAT
CTCGGCAGTG GAATGATCGC CATTTGGCTG ACACGCGGCT TTCCAGCCGA GGCGCGACGC
GTGGCGGCGG GCAACTTCCT CTTCCGGGCG CTTGGCGCCG CGATCACCTT ACCGGTCTGC
GGTGTTTTGG CGGGCCGCAT TCAGGCTCTG GGCACCACCC CTGCGGAGCA GCTCGTCCAT
TTTCATCTGG TCTTCAATGC CTGCCTGGTG CTCATTTGCC TTCCGCTTTC GCAGCTTGCT
GCCGGCGCCG TCTCGTCACT CGTGAAGTCG GACCCTGGAC GCTTCGACGA TAACGACCCG
CTCGCCGGTC GCATCAGCGC TCTGGACGAG GGGTTGCTCG ACAGCCCCGA TGCCGCTCTC
GCCGCGGCAA CGCGCGAGGT GCTGTTCATG GGTGAAATGG TCGAGCGGAT GCTTTGTCCG
GTAATGGAGC TTCTGGAGCA TCCAAATCGA AGAAAGCTTG AAGAGATCCG CCGTCTCGAC
GAGCACGTCA ATCGCGCCCA CCGCGGTATC AAGCTCTATC TCGCAGCGAT CAACCGCGGC
GTGCTTGATG AGCCCCAGTC TCGGAAGGGA GTTGAGTTGA TCGATATCGC GATCAACCTC
GAGCATGCCG GGGACATCGT CTCCAAGACC CTTGTGGAAA TCGTCCGCGA CAAGCTGGAG
AACGGCAACA GCTTTTCCAA TGAAGGCTGG ACCGAGCTCA AAATGCTTCA TGCCAGCGTG
CGCGACAATA TGCGTCTCGC ATTCAATCTG CTGGTTTCGG GCGACCCGGC CATGGCGCGC
AGGCTCGTGC GCGAGAAGGA GCGAGTGCGT GGGCTCGTGC GCGAAAGTCG CGAAAGGCAC
CTGGCGAGGC TGCGGGCAGG GCGCCCCGAA AGCGTCGAGT CCAGCAATAT GCACCTCGAA
ATCGCGCGCG CGCTCAAGGA GGTGAATTCT CTTCTCGCAA CGCTTGCCTA TCCCATTCTG
AAGCAGAGAG GCGATCTGCT CGAAAGCCGG CTCAGGCTGG CGAAGGTATC ATAA
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| Protein sequence | MTVITLSLHL AGATVLLLYA VHLVRSGVEN AYGPSLKRVL AKGGERRVYA AASGTALAVL
LQSSTAVAML ASGLAASGYL TLNTSLAVLL GADFGSALVV RVLSFDLGWM SPLLLAAGGL
CYLKGRTDKF HEIGRMLLGI AFVLMSLKLI GEATVPLKRS EVLPAIVGYL AEDQVMSFVA
AALFTWIVHS SVAVLILILG FAAQGLLPIE AGLPLILGAN LGSGMIAIWL TRGFPAEARR
VAAGNFLFRA LGAAITLPVC GVLAGRIQAL GTTPAEQLVH FHLVFNACLV LICLPLSQLA
AGAVSSLVKS DPGRFDDNDP LAGRISALDE GLLDSPDAAL AAATREVLFM GEMVERMLCP
VMELLEHPNR RKLEEIRRLD EHVNRAHRGI KLYLAAINRG VLDEPQSRKG VELIDIAINL
EHAGDIVSKT LVEIVRDKLE NGNSFSNEGW TELKMLHASV RDNMRLAFNL LVSGDPAMAR
RLVREKERVR GLVRESRERH LARLRAGRPE SVESSNMHLE IARALKEVNS LLATLAYPIL
KQRGDLLESR LRLAKVS
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