| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4859 |
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| Symbol | |
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| ID | 5318844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1360143 |
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| End bp | 1361162 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776644 |
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| Product | taurine ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001313576 |
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| Protein GI | 150376980 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0843259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCACT ACAGAAAATT CAAGCTTATA TCCGGCGCCC TTGCGATAGC GACCGGGCTG
TTAGCCGGCT TTGCGGCCCG GGCGGAAACC AGTGTCGTCG TCGGCTACCA GCAGATCGTC
GGCCCGTTCA TTTCGGCAAT CGCGGATGGC CGCTTCGATG CCGCAGCCAA GGAGGCCGGC
TACTCGATCG ATTGGCGCCA GTTCAGCTCG GGAGGCGACA TTTCGACGGC GCTTGCATCG
GGTAATGTGC CGATCGGCGT TATCGGTTCG ACCGGTACGA CAGCCGCCGC GACCCGCGGC
GTCGAGCTCG AACTTTTCTG GATCCTCGAC AATATCGGCA AATCGGAAGC GCTTGTCGCA
CGCGAGGGAT CCGGCATCGC AAAGCCGGAA GATCTGATAG GAAAGAATGT CGGCGTTCCC
TTCGTGTCGA CCTCTCACTT CCATCTGCTG GTCGGCCTGG GAGAGGTCTG GAAAATCGAT
CCGCGGGAAG TGAACATCCT CAACATGAAG CCGCCGCAGA TCGTCGCCGC CTGGCAGCGC
GGCGATATCG ACGCCGCCTA TGTCTGGCCG CCGGCCCTTT CGGAGCTCCT GAAAACGGGT
AAGGTGATCT CGGATTCCGA GGCGGTCGGC GCGGCGAGCG TGCCCACATT CGACGGCCTC
GTGGTCGATA AGAAATGGGC CGAGGAAAAT CCGGATTTCA TGGCGGCCTT CACCAGGGTG
CTCGCCGAGT CCTATGCCGA TTTCAAGGCC AATGGAAGCG GCTGGACGGC GGACTCGCCG
GAGGTGCAGG GCATGGTCAA GTTGATCGGC GGCGACGCCG AGGGTATCGT CCAGGCCCTC
AACCTTCTAT CCTTCCCGAC CGCCGAGGAA CAGGTCTCCG ACAGGTGGCT TGGCGGCGGT
GCCGTCCGGG CACTGGAGGC GAGCGCCAGG TTTCTGGTCG AGCAGAAGCA GATCGACAAT
GCGCTCGACG ATTACGCGCC CTTCGTCAAC AGCGCCTACG CGAAAGAAGT CTCCAAGTAG
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| Protein sequence | MIHYRKFKLI SGALAIATGL LAGFAARAET SVVVGYQQIV GPFISAIADG RFDAAAKEAG
YSIDWRQFSS GGDISTALAS GNVPIGVIGS TGTTAAATRG VELELFWILD NIGKSEALVA
REGSGIAKPE DLIGKNVGVP FVSTSHFHLL VGLGEVWKID PREVNILNMK PPQIVAAWQR
GDIDAAYVWP PALSELLKTG KVISDSEAVG AASVPTFDGL VVDKKWAEEN PDFMAAFTRV
LAESYADFKA NGSGWTADSP EVQGMVKLIG GDAEGIVQAL NLLSFPTAEE QVSDRWLGGG
AVRALEASAR FLVEQKQIDN ALDDYAPFVN SAYAKEVSK
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