| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4815 |
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| Symbol | |
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| ID | 5318630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1334568 |
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| End bp | 1335872 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776609 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001313541 |
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| Protein GI | 150376945 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGT CCCATCACGC TCCGCTTCTT CGCAGTACCT TCGTAGCTGC GCTGGCACTT
TTGAATGGAG CATTGACGCC CAATATGGCC GCGGCTGCCG CGATTGCGCC CGAAACGAAA
ATCCGCCTGA AGATCATGCA GTGGATGCCC ACCAAGGGTG AATATATCCA ATGGGCGCTT
GGGGGCGATT TTGTCGTATC GGAGGGGGGG ACCGTCACGA TACCCGTCAT TGGGGCGGTT
ACCGTGGGAG ACCTCGACGA GGCGCGCCTT GCCGCCGAGA TCGCCAGGCG GCTGCAAGCC
AAACTCGGCT TGATGGAAGC ACCGGAAGCA AGCATCGAAG TCGTCGAGTA TCCGCCGGTC
TACGTCCTGG GTGACGTGAC AAAGCCGGGA AAATATGAGT TTCGCCCCGG ACTGACCGCT
TTGCAGGCCC TGGCCATGAG CGGCGGAGAG CTCCGTCAGG CAAACCCCAC GCAATCGCAA
GACAGGATGA AGCTGATCGG CGATCTGAAG AGCGTCGATC TCGCTCTCCT GCGCAGCAAT
GCCAGAATAG CAAGGTTGCA GGCGGAAGTG TCGGGAGTGA AGGAAGTACA TTTTCCCGAG
CCCATAGGGG CCGATGCATC GCATGTGACG GAGATCCAGA ACCAGGAGCG CATTATCTTT
TCGACGCGTG CGAACGTGCT CACGCGCCAA TCGAAATCGC TTGACGAACT GCGCAATCTC
CTCGACCAGG AAATCCGCGT CCTCGAAGAG AAAGTCAATG GCTCGGACGC CAGCATAAGA
GCTGCCGACC AGGAGCTCAA AGGTGTGAGG AGCCTGGTGG AGCGCGGCGT CGCCGTCGCA
TCGCGCCAGT CGGATCTCGA GCGCGAACTT GCCGGCTATC ACGCCAGTCG TCTCGATTTC
ATCACCGCCA TTATGCGCGC CCGACAGGAA ATCAGCGGAA CGACACGCAG TCTCGAGGGA
CTTTACGACA ACCGCCACGC GGAAGTCGCC AGCGAACTGC AGGCGGAGCA GGCCGCGCTC
GAACAACTGA AGTTGAAGCG GGTCACCACG GAGAAGCAAC TGCTCGACAT GCTTGCTGCA
GACGATAACT CGCCTCCGCC TGGCGAAGAG GCGTCGCCAA GTTTCAAGAT CATCCGTCGG
GGCGATGAGA AGACCGACGA GGTCAGGGCG TCCGGTTCGA CCATGCTCAG GCCGGGAGAT
GTCATTCGGA TCGTCCGGCC CGCGCGCCAG GATCCCGCTA TATCCGCGGG TCCGCTGAGC
TCGCCTCTTT CGACCAGCTC ACAACCGGAT CGGGTCAGCC AGTGA
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| Protein sequence | MNASHHAPLL RSTFVAALAL LNGALTPNMA AAAAIAPETK IRLKIMQWMP TKGEYIQWAL
GGDFVVSEGG TVTIPVIGAV TVGDLDEARL AAEIARRLQA KLGLMEAPEA SIEVVEYPPV
YVLGDVTKPG KYEFRPGLTA LQALAMSGGE LRQANPTQSQ DRMKLIGDLK SVDLALLRSN
ARIARLQAEV SGVKEVHFPE PIGADASHVT EIQNQERIIF STRANVLTRQ SKSLDELRNL
LDQEIRVLEE KVNGSDASIR AADQELKGVR SLVERGVAVA SRQSDLEREL AGYHASRLDF
ITAIMRARQE ISGTTRSLEG LYDNRHAEVA SELQAEQAAL EQLKLKRVTT EKQLLDMLAA
DDNSPPPGEE ASPSFKIIRR GDEKTDEVRA SGSTMLRPGD VIRIVRPARQ DPAISAGPLS
SPLSTSSQPD RVSQ
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