Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4802 |
Symbol | |
ID | 5318689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1321175 |
End bp | 1322296 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776596 |
Product | glycosyl transferase family protein |
Protein accession | YP_001313528 |
Protein GI | 150376932 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.858117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATATTC TCACGCGCAC GGCAGCGAAG CTCGCCAACG GGCGGATCGA GGAACCGCGC GCGCTAAATC GGATCGCCCG CGTCACCGTC GTTGTTCCTT GCTACAACTA CGGACGTTAT CTGCGGCAAT GTGTCGAAAG CGTCACGCTG AACCAACCAG GCGTCGACGT CGAAGTCATC ATCGTGGATG ATCGATCGAC TGACGATAGC GCCTATGTGG CGCGCTCAAT CCAGGATGCA GACAAGCGCG TACACTTGAT AGCGCACAAA CAAAACAAGG GTCACATTGC AACCTATAAC GACGGGCTGG AAGCCGCGAC CGGCGAATTC GTGCTGTTAC TTTCTGCCGA CGATCTGGTG ACACCGGGTG CACTGACCCG TGCTGCTGAA TTCCTTGCTG CGGAACCGTC TGTCGGGCTT GTTTATGGTA ACGCGATCCA CTTCCATGGC GAGTTGCCCG AGAGCCGAAT TGCCGGAGGG AGTTGGATCG TATGGCCCGG CGTCGATTGG CTGCGGATCC GCTGCCGGTC GGGATTCAAT ACCATCACCT CCCCGGAGGC GGTTATGCGC ACGGCAGTGC TGCGCGAAAT CGGCAACTAT CGCGCCGACC TGCCGCATGC TGGCGACTTC GAGATGTGGC TTCGCACCTC TGCAGTGTCA GACATCGGCT TCCTTGCCGG CGTTGATCAG GCCTATTACC GACATCACGC GACCAATATG AACAAACAGG ATTTCGGCTC GGGCACCGCC CTCGGTCAGC TGATCGACCT CAAACAGCGC TGGCAGTCCT TCGAAGCGGT ATTCAGCGGC GTTGGATCTG GGCTGGAGGA GGGACCACAA CTGCTGGAGC TTGCCCGCAG CACCATCGCG CGTCAGGTGC TGGAGCGCAT CAACTATGCC CATGCCAAAG GTTGGCGTGA TTTTCCCACA ACGGAATTCG AGGCTCTCGC GAGAGAAATC CACCACAGCC CTGCGTCCAC CAGAGCGGGA AAAGTGCTCG CCAAAAGGAG ACACGACGGA ACAGGCAGGC TTCCTGCTCA TGCTCTATGG CCGGCATGGG CGGTGCGCTG GCGCCTGGAG GAATGGTGCC GCCGGTGGCG TCGCGGCCAG ATCGGCGTCT AG
|
Protein sequence | MDILTRTAAK LANGRIEEPR ALNRIARVTV VVPCYNYGRY LRQCVESVTL NQPGVDVEVI IVDDRSTDDS AYVARSIQDA DKRVHLIAHK QNKGHIATYN DGLEAATGEF VLLLSADDLV TPGALTRAAE FLAAEPSVGL VYGNAIHFHG ELPESRIAGG SWIVWPGVDW LRIRCRSGFN TITSPEAVMR TAVLREIGNY RADLPHAGDF EMWLRTSAVS DIGFLAGVDQ AYYRHHATNM NKQDFGSGTA LGQLIDLKQR WQSFEAVFSG VGSGLEEGPQ LLELARSTIA RQVLERINYA HAKGWRDFPT TEFEALAREI HHSPASTRAG KVLAKRRHDG TGRLPAHALW PAWAVRWRLE EWCRRWRRGQ IGV
|
| |