Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4781 |
Symbol | |
ID | 5318403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1298718 |
End bp | 1299062 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776579 |
Product | IS66 Orf2 family protein |
Protein accession | YP_001313511 |
Protein GI | 150376915 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.354351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCCT CCGGCGTGAA GGTGTTCCTC GCCAGTCATC CTGTCGACTT CCGCAAGGGT CCCGACAGCT TGCTGTCGCT GGTGCGGGAT GCCGGCAATG ATCCGTTCAA CGGCGCGCTA TACGTCTTCC GGGCCAAACG AGCGGATCGA GTGAAGATCG TCTGGTGGGA CGGCTCCGGC GTCTGCCTTT ATGCAAAGCG GCTGGAAAAA GCGCAGTTCT GCTGGCCCCG CATCGGCCAT AACCGGGTTC AGCTCAACCA TGCCCAGCTT CTGGCGCTGA TCGATGGCAT GGACTGGAAG CGGGTTCGAT CCGTGCCGGT CAAGCCGCCG GAGATTGTTG GGTAA
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Protein sequence | MIPSGVKVFL ASHPVDFRKG PDSLLSLVRD AGNDPFNGAL YVFRAKRADR VKIVWWDGSG VCLYAKRLEK AQFCWPRIGH NRVQLNHAQL LALIDGMDWK RVRSVPVKPP EIVG
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