Gene Smed_4781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4781 
Symbol 
ID5318403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1298718 
End bp1299062 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content61% 
IMG OID640776579 
ProductIS66 Orf2 family protein 
Protein accessionYP_001313511 
Protein GI150376915 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.354351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCT CCGGCGTGAA GGTGTTCCTC GCCAGTCATC CTGTCGACTT CCGCAAGGGT 
CCCGACAGCT TGCTGTCGCT GGTGCGGGAT GCCGGCAATG ATCCGTTCAA CGGCGCGCTA
TACGTCTTCC GGGCCAAACG AGCGGATCGA GTGAAGATCG TCTGGTGGGA CGGCTCCGGC
GTCTGCCTTT ATGCAAAGCG GCTGGAAAAA GCGCAGTTCT GCTGGCCCCG CATCGGCCAT
AACCGGGTTC AGCTCAACCA TGCCCAGCTT CTGGCGCTGA TCGATGGCAT GGACTGGAAG
CGGGTTCGAT CCGTGCCGGT CAAGCCGCCG GAGATTGTTG GGTAA
 
Protein sequence
MIPSGVKVFL ASHPVDFRKG PDSLLSLVRD AGNDPFNGAL YVFRAKRADR VKIVWWDGSG 
VCLYAKRLEK AQFCWPRIGH NRVQLNHAQL LALIDGMDWK RVRSVPVKPP EIVG