| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4747 |
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| Symbol | |
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| ID | 5319146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1268734 |
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| End bp | 1269294 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776545 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001313477 |
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| Protein GI | 150376881 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.331023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00240822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCTAACG GATTGTCAAA ACTGGGCCGG GGTTTGTCCT GGCTGGGTAC GCTCTCGCTC
TGGACGGCGG GTGTGGGCCT CGTCGCGATG ACGCTCATCG TCGCGTGGCA GGTTTTCTGC
CGCTATGTCT TGAACGACTC ACCAAGCTGG ACCGAGCCCG GCGCCGTCAT GCTGATGAGC
TGGTTCATCT TTCTTGGTGC AGCTGTCGGC GTACGCGAAA ATTACCATCT CGGCTTCGAC
GTGCTGCTCT ACGTGGTGCC TAAATCCGGC AAGATCTGGC TCCGCATGAT TTCCGATCTC
GTCGCGCTCG CATTCGGCTT CGGCATGATC TGGTACGGAG CTCAGCTCGT CGCCCTCACC
TGGAACACCG TCCTGCCCTC TCTGCAGATT TCCGGCGGCT GGAGTTACGT GCCGCTCGTC
GCGGGCGGCG TCCTCATCTG CTTGTTCGCC CTGGAGCGCA TCGTCCTGCG GCTTGCCGGT
GAGCCGATCG ACGACGTTCT CGATGAAATG CCGCCGGCGG AGGTTGCTGC CGATCTCGAA
ACCGCGCAAA TAAAGGCCTG A
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| Protein sequence | MSNGLSKLGR GLSWLGTLSL WTAGVGLVAM TLIVAWQVFC RYVLNDSPSW TEPGAVMLMS
WFIFLGAAVG VRENYHLGFD VLLYVVPKSG KIWLRMISDL VALAFGFGMI WYGAQLVALT
WNTVLPSLQI SGGWSYVPLV AGGVLICLFA LERIVLRLAG EPIDDVLDEM PPAEVAADLE
TAQIKA
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