Gene Smed_4694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4694 
Symbol 
ID5318833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1211619 
End bp1211948 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content59% 
IMG OID640776492 
ProductPilT domain-containing protein 
Protein accessionYP_001313424 
Protein GI150376828 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.499917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGAATG AGGCCCGTGC TCTCATCGAA GGCCCCGGGA ATACGCTCGA CTTCAGCGCG 
GCGAGCGTGT GGGAGATCGC GATCAAACGT GGCTTGGGCC GGATGGATTT CGATGCCGAT
CCACGGCTTC TGCGTCGAGG TTTGCTGGAC AATGGCTACC AGGAATTACG GGTAGAGGGC
ACCCATGCGG TGGCACTTGA TCAACTGCCC CCGATCCATC AGGAACCGTT CGACCGCATT
GCGATCGCGC AGTCTCTCGT CGAAGGATTT ACGCTCGTCA CGTCCGATGA AGTTGTTAGC
CGCTACCCCG GTCCTAGCCG GGTTGTTTAG
 
Protein sequence
MSNEARALIE GPGNTLDFSA ASVWEIAIKR GLGRMDFDAD PRLLRRGLLD NGYQELRVEG 
THAVALDQLP PIHQEPFDRI AIAQSLVEGF TLVTSDEVVS RYPGPSRVV