Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4597 |
Symbol | |
ID | 5318507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1096819 |
End bp | 1098066 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776398 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001313330 |
Protein GI | 150376734 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.211799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.982264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCTGA AACCGAAGAT CGCCGTCGTG CTGAAGGGTT ATCCGCGCCT TTCGGAAACG TTCATCGCAC AGGAATTGCT GGGCCTTGAA AGAGCAGGGC ATGAACTCGT CCTAATCGCC CTGCGCCGAC CGACTGATGG GAAGCGCCAC CCCGTCCATG ATGAAATTGG AGCGCCCGTC CATTACCTTC CGGAATATCT GCACGAGGAG CCGTGGCGCG TCCTTCGCGC CCTAACGAAG ACCGTGACGA AACGCTCCTT CTGGCGGATG CTCCGGCCGT TCTTCAGGGA TCTCGCGCGC GACAGATCGC GCAACCGTTT CCGTCGCCTC GGCCAGGCTC TGGTGCTCGT CGCCGAATGG CCGGACGATG CCGGCTGGTT GCATGCTCAT TTCATACATA CGCCGGCATC GGTGACAAGC TATGCCAGCA TGATCTCCGG CATACCCTGG ACTTGTTCCG CGCATGCCAA GGACATCTGG ACTTCGCAGG ATTGGGAGCT TTCCGACAAG CTCGGCCGCG CGCGCTGGAC GGTGACCTGC ACGCGAAGCG GCTATGAGCA CCTGCGGGAC CTGTCGAGCG ACAAGACCCG AGTGCATCTG AGTTATCACG GCCTCGATCT CGATCGGTTC CCGTCCTTCG AAGGTGAGCA TTCCCGGCGC GATGGCAGTG TTCCGGACGA CCCGGTGCGC ATCGTCAGTG TCGGACGCGC CGTCTCGAAA AAGGGATATG ACCTTCTCTT GAAGGCGCTG TCGCTGCTGC CTGCGGACCT CAGCTGGCGC TTCGATCATA TAGGTGCGGG CGAGCTCACC GGCAAGCTCC AGGCGCTTGC CGGTGAACTC GGCCTCGAAG ATCGCTTAGG ATGGCACGGC GCACTGGATC AAAAGGAGGT TCTGAGCCGC TACCGAGAGG CCGACATCTT CGCGCTCGCC TCTCGGGTCG CGGCGAATGG TGACCGAGAC GGCCTGCCGA ATGTTCTCGT AGAGGCATCG AGTCAGCGCC TTGCCTGTAT CTCGACCGCG GTCTCCGGAA TACCCGAACT TATCGATGAC GGTCATAATG GTATGCTGGT GCCGCCGGAA AATCCGACGG CACTTGCCGC GGCAATAGAG CGATTGATCC GCGATCCGGA TCTTCGCCGG CAACTTGGTG CCGCCGCGGA ACGGCGCGTG CGCGCCGATT TCGACCACCA TTCGAGCGTC GGTCAGTTGA TCGGGCTCTT CGAAAGCGAA TGGAGAAGAA GCCCTTGA
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Protein sequence | MSLKPKIAVV LKGYPRLSET FIAQELLGLE RAGHELVLIA LRRPTDGKRH PVHDEIGAPV HYLPEYLHEE PWRVLRALTK TVTKRSFWRM LRPFFRDLAR DRSRNRFRRL GQALVLVAEW PDDAGWLHAH FIHTPASVTS YASMISGIPW TCSAHAKDIW TSQDWELSDK LGRARWTVTC TRSGYEHLRD LSSDKTRVHL SYHGLDLDRF PSFEGEHSRR DGSVPDDPVR IVSVGRAVSK KGYDLLLKAL SLLPADLSWR FDHIGAGELT GKLQALAGEL GLEDRLGWHG ALDQKEVLSR YREADIFALA SRVAANGDRD GLPNVLVEAS SQRLACISTA VSGIPELIDD GHNGMLVPPE NPTALAAAIE RLIRDPDLRR QLGAAAERRV RADFDHHSSV GQLIGLFESE WRRSP
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