Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4569 |
Symbol | |
ID | 5319237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1059069 |
End bp | 1059983 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776370 |
Product | formyl transferase domain-containing protein |
Protein accession | YP_001313302 |
Protein GI | 150376706 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCG TCTTTGTAGG CGCCGTCGAA AGCTCCAAAA TCGCCTTGGA GGCACTCATA AAGGCGGGGC GCCCTCCGGC GCTTGTGATA ACGCTTCCGC CCGAAGCGGC GGGACGTCAT TCTGATTTTG TGGACCTCGG AAACCTCGCA CTGGCAGCCG GAAGCGCGGT CCACCATTCG ACCGATATCA ATGCTCCGGA GACGCTGGAG GCCGTTACAG CAGTCGCCCC GGATCTCACG CTCGTCATAG GCTGGTCGCA GGTCTGCCGG CGTCCATTTC GCGAGATCGC GCGTGTGGGC ACCGCCGGCT TTCATCCGGC GGCATTGCCG CGTCTGCGCG GCCGCGGGGT CATTCCCTGG ACTATACTCC GCGGCGAAGA GAAAACCGGC TCGACCCTCT TCTGGCTGGA CGACGGCGTC GATTCGGGAC CTATCCTCTT GCAGCGGCAA TTTCCGGTCG ATCCCGACGA AACCGCCCGC AGCCTTTATA CCAAGCACAC TGAAAACCTG GCTCAGATGA TCGTGGAGGC CGCGGCACAG GTCGAAGCCG GAAATGCCGC CCGCGCTGAA CAGAACCAGG CGGAGGCGAG CTATTGCGCA AAACGCACCG CGGAAGATGG CTTGATTGAT TGGCGTCAGT CCGCCGCCTC TATATTGCGC CTGATCCGCG CAGTCGGAGC CCCTTATCCG GGTGCCTTCA CATTCTACAA CGGGCAGAAA ATTCGGATCG ATGCCGCGGT CCCCGTTGAG AATTCCAGCC GGTTCATTGG TTTGACAGGT CAGATTCAAG CCATTACCGA GCGCGGCTTC ATCGTGCTTT GCGGAGATGC GGAATGTATC GAAGCGACAT CCTGGAAATG GGCGTCGGAA CGACGACCGC CAATTCATGG CAAGCTCGGC GGGACGGCCG CATAG
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Protein sequence | MRIVFVGAVE SSKIALEALI KAGRPPALVI TLPPEAAGRH SDFVDLGNLA LAAGSAVHHS TDINAPETLE AVTAVAPDLT LVIGWSQVCR RPFREIARVG TAGFHPAALP RLRGRGVIPW TILRGEEKTG STLFWLDDGV DSGPILLQRQ FPVDPDETAR SLYTKHTENL AQMIVEAAAQ VEAGNAARAE QNQAEASYCA KRTAEDGLID WRQSAASILR LIRAVGAPYP GAFTFYNGQK IRIDAAVPVE NSSRFIGLTG QIQAITERGF IVLCGDAECI EATSWKWASE RRPPIHGKLG GTAA
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