Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4561 |
Symbol | |
ID | 5319229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1048954 |
End bp | 1049793 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776362 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_001313294 |
Protein GI | 150376698 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC TTTGCCAAAT ATTCGAGCAC ATAGCGCTTG AAGCGGGTGC GGCCATTCTC GAGGTCTACG ACGCCGGTCC CGAGGTCTGC TACAAGGATG ATCAATCGCC CGTCACCGAA GCCGACGAGC GAGCCGAAGC GATCATCCTT GAGCGGCTTG CCGCGGCGTT TCCGGGGATC CCCGTCGTCG CCGAGGAGTC TGTCTGCTCG GGCCGCGTCC CTGATATAAG CGGTGGCTCG TTCTTTCTCG TCGATCCGCT CGACGGTACG AAGGAGTTCA TCAACCGCCG CAGCGACTTT ACCGTCAACA TTGCCCTCAT CAAGGGCAAT GTTCCGGTTG CCGGGATCGT CTACGCACCG GCGCAGCGTT GCGCTTATGT CGCCGATGGG GGCAGGGCGG AGAAGCTTCT GCTCGACAAG CTCTGGGCGC TCGAACACCG TCAGCCGATC CGCGTGCGGA TGCGGGGTGC GGAACTGACG GCGGTTGCCA GCCGCTCGCA CAACAGTTCC GAAACCGAGG CTTTTCTCAC CGGGCACGGC GTCATGAACT ATGCGTCCGT CGGCTCGTCG CTCAAATTTT GCCTGCTGGC GGAGGGCAAG GCGGACGTCT ATCCGCGTTT CGGCCGCACG ATGGAGTGGG ATACGGCGGC CGGGGACGCG GTGCTGAGGG CCGCGGGCGG ATCGGTGGTA CGTTTGGACG GCTCGCGCCT GCTCTACGGC AAGACGATGC AGGACGAGGA CAGCGACTTC GCAAATCCGC ACTTCATCGC CTGGGCGGAT ATGTCCCCGG TCCATTTAAC GGCTGCCGAG GGCGTTGGGG CGGCTCATGC GCTGACGTGA
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Protein sequence | MTPLCQIFEH IALEAGAAIL EVYDAGPEVC YKDDQSPVTE ADERAEAIIL ERLAAAFPGI PVVAEESVCS GRVPDISGGS FFLVDPLDGT KEFINRRSDF TVNIALIKGN VPVAGIVYAP AQRCAYVADG GRAEKLLLDK LWALEHRQPI RVRMRGAELT AVASRSHNSS ETEAFLTGHG VMNYASVGSS LKFCLLAEGK ADVYPRFGRT MEWDTAAGDA VLRAAGGSVV RLDGSRLLYG KTMQDEDSDF ANPHFIAWAD MSPVHLTAAE GVGAAHALT
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