Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4545 |
Symbol | |
ID | 5319046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1032855 |
End bp | 1033913 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776346 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001313278 |
Protein GI | 150376682 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.322135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC CGATCGAAAC ACCCGCCGTG CTGGTCGATC TCGATATCGC CCGGCGCAAT ATCCTCGCGT TTCAGGCCTA TGCCGACCGC CACGGCATCC GCGTGCGCCC CCACATAAAG ACCCATAAGC TTCCACAGCT GGCCGAGCTG CAGCTCGACT CAGGCGCGAT TGGCATCACC TGCCAGAAGG TTACGGAGGC GGAAGCGATG GTCGACGGCA GCGCCCGGAT TAAAGAGGTC CTGATCACCT ACAACCTCCT CGGGGAGGAG AAGCTCGCGC GGCTCGCACG ACTCAGTGAA AAGGTCACGG TGAGCGTCGT CGCGGACAAT GCGACTGTCG TTGACGGGCT CGGAGCCTTT TTTGCCGATG CAGGCAAGCC CATGACCGTG CTCGTGGAAT GCAACACCGG TGCGGAACGT TGCGGCGTCG CAACGCCGGC CGAGGCGGCC CGCCTCGCCA TGCGCATTGC CGCGGCGCCG GGACTGCGCT TCGGCGGCTT GATGACCTAT CCGCCAGCCG ATGGCGCCGC ACGCGTTCAA ACCTTCATGA GCGAGGCGAA GCAGCTCATC GAGGCCAGGG GAATCGAAGT TCCCTGTGTT ACGTCAGGCG GCACGCCCGG CATGATGCAA GCGGCCGAGG CCCCGGTAGC AAGCGAGCAC AGGCCGGGGA CATATATCTA TAACGACCGG TCGCTGGTTG CCCGTGGCGT GGCCTCATGG GATGACTGCG CCCTCACAGT GCTCGCGACC GTCGTCTCGG TTCCAAGCGA AAATCGAGCG ATCATCGACG CCGGCAGCAA GGTCCTGACC TCGGACCTGC TTGGTCTCAC CGGTTACGGG CACGTACTTG ATCGCGACGA CATCCGGATC GACCAGCTCT CCGAAGAGCA TGGCCGCCTC GTCTCGGACG GCTCTATCCG TCTTACGGTC GGCCAACAGC TCCGCATCGT TCCGAACCAC GCCTGCGTCG TGACCAACAT GGTCGACGCG GTCCACGTCA TCGAAGATGG CACGCCCAAA GGGACATGGC CGGTTGTCGC CCGCGGCCGC GTCCTCTGA
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Protein sequence | MTLPIETPAV LVDLDIARRN ILAFQAYADR HGIRVRPHIK THKLPQLAEL QLDSGAIGIT CQKVTEAEAM VDGSARIKEV LITYNLLGEE KLARLARLSE KVTVSVVADN ATVVDGLGAF FADAGKPMTV LVECNTGAER CGVATPAEAA RLAMRIAAAP GLRFGGLMTY PPADGAARVQ TFMSEAKQLI EARGIEVPCV TSGGTPGMMQ AAEAPVASEH RPGTYIYNDR SLVARGVASW DDCALTVLAT VVSVPSENRA IIDAGSKVLT SDLLGLTGYG HVLDRDDIRI DQLSEEHGRL VSDGSIRLTV GQQLRIVPNH ACVVTNMVDA VHVIEDGTPK GTWPVVARGR VL
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