Gene Smed_4545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4545 
Symbol 
ID5319046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1032855 
End bp1033913 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID640776346 
Productalanine racemase domain-containing protein 
Protein accessionYP_001313278 
Protein GI150376682 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.322135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CGATCGAAAC ACCCGCCGTG CTGGTCGATC TCGATATCGC CCGGCGCAAT 
ATCCTCGCGT TTCAGGCCTA TGCCGACCGC CACGGCATCC GCGTGCGCCC CCACATAAAG
ACCCATAAGC TTCCACAGCT GGCCGAGCTG CAGCTCGACT CAGGCGCGAT TGGCATCACC
TGCCAGAAGG TTACGGAGGC GGAAGCGATG GTCGACGGCA GCGCCCGGAT TAAAGAGGTC
CTGATCACCT ACAACCTCCT CGGGGAGGAG AAGCTCGCGC GGCTCGCACG ACTCAGTGAA
AAGGTCACGG TGAGCGTCGT CGCGGACAAT GCGACTGTCG TTGACGGGCT CGGAGCCTTT
TTTGCCGATG CAGGCAAGCC CATGACCGTG CTCGTGGAAT GCAACACCGG TGCGGAACGT
TGCGGCGTCG CAACGCCGGC CGAGGCGGCC CGCCTCGCCA TGCGCATTGC CGCGGCGCCG
GGACTGCGCT TCGGCGGCTT GATGACCTAT CCGCCAGCCG ATGGCGCCGC ACGCGTTCAA
ACCTTCATGA GCGAGGCGAA GCAGCTCATC GAGGCCAGGG GAATCGAAGT TCCCTGTGTT
ACGTCAGGCG GCACGCCCGG CATGATGCAA GCGGCCGAGG CCCCGGTAGC AAGCGAGCAC
AGGCCGGGGA CATATATCTA TAACGACCGG TCGCTGGTTG CCCGTGGCGT GGCCTCATGG
GATGACTGCG CCCTCACAGT GCTCGCGACC GTCGTCTCGG TTCCAAGCGA AAATCGAGCG
ATCATCGACG CCGGCAGCAA GGTCCTGACC TCGGACCTGC TTGGTCTCAC CGGTTACGGG
CACGTACTTG ATCGCGACGA CATCCGGATC GACCAGCTCT CCGAAGAGCA TGGCCGCCTC
GTCTCGGACG GCTCTATCCG TCTTACGGTC GGCCAACAGC TCCGCATCGT TCCGAACCAC
GCCTGCGTCG TGACCAACAT GGTCGACGCG GTCCACGTCA TCGAAGATGG CACGCCCAAA
GGGACATGGC CGGTTGTCGC CCGCGGCCGC GTCCTCTGA
 
Protein sequence
MTLPIETPAV LVDLDIARRN ILAFQAYADR HGIRVRPHIK THKLPQLAEL QLDSGAIGIT 
CQKVTEAEAM VDGSARIKEV LITYNLLGEE KLARLARLSE KVTVSVVADN ATVVDGLGAF
FADAGKPMTV LVECNTGAER CGVATPAEAA RLAMRIAAAP GLRFGGLMTY PPADGAARVQ
TFMSEAKQLI EARGIEVPCV TSGGTPGMMQ AAEAPVASEH RPGTYIYNDR SLVARGVASW
DDCALTVLAT VVSVPSENRA IIDAGSKVLT SDLLGLTGYG HVLDRDDIRI DQLSEEHGRL
VSDGSIRLTV GQQLRIVPNH ACVVTNMVDA VHVIEDGTPK GTWPVVARGR VL