| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4542 |
|---|
| Symbol | |
|---|
| ID | 5319043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1029847 |
|---|
| End bp | 1030713 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776343 |
|---|
| Product | sulfate ABC transporter, inner membrane subunit CysW |
|---|
| Protein accession | YP_001313275 |
|---|
| Protein GI | 150376679 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4208] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0989166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATG ACGCTTCCAG TACGCTGGTG ACGACGGCCA CCTCGGAGAC ACGGCTTTCG
CGTGGGATCC TGACCGCAGT CGCGCTCGGA TTCGTCCTGC TCTTCCTGCT CCTGCCGCTC
GCTACGGTGT TCATCGAGGC CTTCCGCAAG GGACCGGCGG AGTTCTTTGC CGCGCTTCGC
GATCCGGAAA CTTTTTCCGC AATCCGCCTG ACGCTCCTGG TTGCGGGCAT CGCCGTGCCG
CTCAATCTCG TCTTCGGGGT GGCAGCCGCC TGGGCGATCG CGAAATTCGA ATTCAAGGGC
AAGGCGTTCC TGACGACGTT GATCGACCTG CCATTCTCGG TTTCGCCCGT GATTTCCGGC
CTCGTCTTCG TGCTGCTCTT CAGCTCACAG AGCATGCTCG GCCCAATCCT GCAAAGCTAC
GACATCCAGA TTCTCTTCGC CGTGCCGGGC CTTGTGCTCG CCACCGTCTT CGTGACTTTC
CCCTTCGTCG CCCGAGAATT GATCCCGCTG ATGCAGGAAC AGGGGACGGC GGATGAGGAG
GCGGCGCTCT CGCTCGGTGC CACCGGCTGG CAGACCTTCT GGCATGTCAC GCTTCCCAAC
ATAAAATGGG GACTGCTCTA TGGCGTGCTT CTTTGCAATG CCCGCGCCAT GGGCGAGTTC
GGCGCGGTTT CGGTCGTCTC GGGTCATATA CGCGGGCAGA CCAACACGAT GCCGTTGCAG
GTCGAAATCC TCTATAATGA ATACAATTTC GTAGCCGCCT TCGCGGTGGC GGCGCTGCTT
GCGCTCCTTG CGCTGGTGAC GCTCGTTTTG AAAACGGCTC TTGAACTCCG CTACAGCGAC
GAGATCGCTG CAAGCCGCAG GCATTGA
|
|---|
| Protein sequence | MAHDASSTLV TTATSETRLS RGILTAVALG FVLLFLLLPL ATVFIEAFRK GPAEFFAALR
DPETFSAIRL TLLVAGIAVP LNLVFGVAAA WAIAKFEFKG KAFLTTLIDL PFSVSPVISG
LVFVLLFSSQ SMLGPILQSY DIQILFAVPG LVLATVFVTF PFVARELIPL MQEQGTADEE
AALSLGATGW QTFWHVTLPN IKWGLLYGVL LCNARAMGEF GAVSVVSGHI RGQTNTMPLQ
VEILYNEYNF VAAFAVAALL ALLALVTLVL KTALELRYSD EIAASRRH
|
|---|
| |