Gene Smed_4523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4523 
Symbol 
ID5318498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1008892 
End bp1011549 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content64% 
IMG OID640776324 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001313256 
Protein GI150376660 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACG AGGTCAAGAC CACCTGCCCC TATTGCGGAG TCGGCTGCGG CGTCATTGCC 
CGTCTGGGTG ATGACGGCGC CGTGAGCGTA AAGGGAGACC CGGAGCATCC TGCCAATTTC
GGCAGGCTCT GTTCGAAAGG ATCGGCGCTC GCAGAAACGC TCGATCTCGA CGGCCGCCTC
CTTCATCCGG AAATCGGCGG CCGTCGCGCA GGCTGGAGCG AGGCGCTCGA CCTCGTTGCC
GAACGCTTTT CGCATGCTAT CGCCGAGCAC GGTCCCGATT CGGTTGCCTT CTACGTCTCG
GGACAGTTGC TGACGGAGGA CTATTACATC GCCAACAAGT TGATGAAGGG TTTCATCGGC
TCAGCAAACA TCGACACCAA TTCTCGGCTT TGCATGTCCT CCTCCGTAGC GGGCCACCGC
CGCGCCTTCG GCTCGGATAC GGTGCCGGGC GTTTACGAGG ACCTGGAACT CGCCGAACTC
GTAGTCCTGA CGGGTTCCAA TCTGGCCTGG TGCCATCCGG TGCTTTATCA GCGCCTTTCA
GCTGCCAAGG CGAACCGACC TGAGATGAAG ATCGTCGTCA TCGATCCACG CCGCACCATG
ACTGCCGACA TCGCCGACAT GCACCTGGCG ATCTCGCCGG ACGGCGACGT CGCCCTCTTC
AACGGCCTGC TTGCCCATCT CGCCGCCAGC GGCGTGATCG ACCGGAACTA TGTCTCGAAG
TGCACGAGCG GTTTCGACGA GGCCGTGGCG GTGGCATCCA GGCTCGATCT TCCGGCAGTT
TCCAACGCGA CCGGCCTGAC GCAGGCGCAG CTTCGCGCGT TCTACCGGCT CTTCGAGACG
ACTGAAAACG TCGTGACCTG CTACAGCCAG GGCGTCAACC AGTCTGCCGC CGGTACCGAC
AAGGTAAATG CCATCATCAA TTGCCATCTT GCGACCGGAC GCATCGGCCG GCCGGGCATG
GGGCCGTTTT CCCTGACCGG ACAGCCAAAT GCCATGGGCG GGCGGGAGGT CGGAGGGCTG
GCAAACATGC TTGCGGCCCA TATGGATATC GAGAAATCGC TCCACCGTGA TCAGGTGCGC
CGTTTCTGGG GCGCGCCGGC AGTGGCGAAC AAGCCCGGCC TCAAGGCGGT GGACATGTTC
CGCGCCGTTG CGGACGGGCG GATCAAGGCC TTGTGGATCA TGGCAACCAA TCCCGTCGTC
TCGATGCCGG ATGCCGATGC CGTCGAAGCG GCGATCAAGG CCTGCCCCTT CGTCGTCGTC
TCCGACATCG TGAGAGATAC CGACACGGCC CGCCACGCCC ACGTGCTTCT GCCCTCGCTG
GGTTGGGGCG AGAAGGATGG CACCGTCACC AATTCCGAGC GGTGCATCTC GCGCCAGCGT
GCCTTTCTGC GAGGCCCCGG GGAGGCGCGG CCCGATTGGT GGCAACTCGC CGAAGTCGGT
AAACGCATGG GCTTCGCCCC AGCATTCGCC TACAATTCAC AGGCCGAGAT CTTCGCTGAG
CATGCGGCGC TTTCGGGTTT CGAGAACAAC GGGCGCCGCG ATTTCGACAT CAGCGCCCAT
GCGGAGATCG GCGGCACCGC TTATGACGGG CTGAAACCTT TTCAGTGGCC GCAGACCAGG
GGCAGCACGC CACAGCAAAG GCGCTTTTTC GCGGACGGCC GGTACTTCCA TCCGGATGGC
CGCGCCCGCT TCGTTGCCAT CGAGGTGCCC GGGCCGAGAC GCCGCGACGC GGCCTTCCCG
TTCACGCTCA ATACCGGCCG CGTGCGCGAC CATTGGCACA CGATGACGCG CACCGGCAGG
AGCGCGCGGC TCTCCGGCCA TCTGGCCGAG CCCTTCGTCG AGATTCACCC GCGCGACGCA
CAGGCGATCG GCGTCAGCGG CGCCGACCTC GTGACCTTGG AAAGTCCGCA TGGGGCGGCA
ATTGTCCGGG CACTCGTCAC CGACCGACAG GCGGAAGGCA ATCTATTCGT GCCGATGCAT
TGGAACGATC AATTCGCTTC CAGGGCGCGG ATCGATGCAC TGGTTGCGCC CATCACCGAC
CCTGTTTCCG GCCAGCCGGC ATCGAAGCAT ATGACGGTTC GTGCGGGTCG CCTTGCAGCA
GCGGTCTATG GCTTCGCGGT CTCGGCGCAC AAGCCTGCGG AGCTCGACGC CGCCTATTGG
GCGATCGCCA GGGCCGAAGG CGGATGGCGG ATGGAACTCG CTTTCGCCGA AAAGGAAATT
GACTGGACCG ACTGGTGCCG GAAGACGTTC GGGATCGCTT CCGAGATAGA GCCGATCGGC
TATACGGACC GCACCTCAGG CGAGCTTCGC CTCGCCTTTT TCGAAGAGGA CCGGCTGCTG
GCCACCTTGT TTCTTTCCCC GCAGCCTGTC GCCGTCGCGC GCAACTGGGC GGTATCGCAG
CTCCGTGCGT CGCATCACAA TCTTGGCAAA CGTTTCGCAG TGGTCGCCGG CCGCCCGGGT
GCCGACACCC CCGACCCAGG CGCGACCGTC TGCTCGTGTT TCAGTGTCGG CGTCAACCAG
ATCACCGCCG CCGTGCGCGT CGGATGCCAT AGCGTCGAAG CGGTGGGCGA AAAGCTCAGC
GCCGGCACCA ATTGCGGCTC CTGCCGTGCC GAAATCAGGG GAATCATAAA TGCTTGCCTC
ACCGTCGCAG CAGAGTGA
 
Protein sequence
MAHEVKTTCP YCGVGCGVIA RLGDDGAVSV KGDPEHPANF GRLCSKGSAL AETLDLDGRL 
LHPEIGGRRA GWSEALDLVA ERFSHAIAEH GPDSVAFYVS GQLLTEDYYI ANKLMKGFIG
SANIDTNSRL CMSSSVAGHR RAFGSDTVPG VYEDLELAEL VVLTGSNLAW CHPVLYQRLS
AAKANRPEMK IVVIDPRRTM TADIADMHLA ISPDGDVALF NGLLAHLAAS GVIDRNYVSK
CTSGFDEAVA VASRLDLPAV SNATGLTQAQ LRAFYRLFET TENVVTCYSQ GVNQSAAGTD
KVNAIINCHL ATGRIGRPGM GPFSLTGQPN AMGGREVGGL ANMLAAHMDI EKSLHRDQVR
RFWGAPAVAN KPGLKAVDMF RAVADGRIKA LWIMATNPVV SMPDADAVEA AIKACPFVVV
SDIVRDTDTA RHAHVLLPSL GWGEKDGTVT NSERCISRQR AFLRGPGEAR PDWWQLAEVG
KRMGFAPAFA YNSQAEIFAE HAALSGFENN GRRDFDISAH AEIGGTAYDG LKPFQWPQTR
GSTPQQRRFF ADGRYFHPDG RARFVAIEVP GPRRRDAAFP FTLNTGRVRD HWHTMTRTGR
SARLSGHLAE PFVEIHPRDA QAIGVSGADL VTLESPHGAA IVRALVTDRQ AEGNLFVPMH
WNDQFASRAR IDALVAPITD PVSGQPASKH MTVRAGRLAA AVYGFAVSAH KPAELDAAYW
AIARAEGGWR MELAFAEKEI DWTDWCRKTF GIASEIEPIG YTDRTSGELR LAFFEEDRLL
ATLFLSPQPV AVARNWAVSQ LRASHHNLGK RFAVVAGRPG ADTPDPGATV CSCFSVGVNQ
ITAAVRVGCH SVEAVGEKLS AGTNCGSCRA EIRGIINACL TVAAE