| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4500 |
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| Symbol | |
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| ID | 5317940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 985653 |
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| End bp | 986429 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776301 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_001313233 |
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| Protein GI | 150376637 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0782266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGA CTGCGGTCAT AACGGGTTCT ACGAGCGGTA TCGGCCTGGC GATCGCCCGG
GCTCTGGCGA AGACCGGGGC CAACATCGTG CTGAACGGTT TCGGCACGGC GGACGAAATC
AGGACTGTCA CGGACGAAGT CGCCGGCTTG ACGTCCGGCA GCGTGCTTCA CCACCCGGCC
GACATGACCA AGCCATCCGA GATCGCCGAG ATGATGGCGA CCGCTGCATC CCGCTTCGGC
GGCGCCGACA TCCTCGTCAA CAATGCCGGC GTGCAGTTCG TCGAAAAGAT CGAAGACTTC
CCCGCCGAGC AGTGGGACCG GATCGTTGCC ATCAACCTCT CCTCCTCCTT TCACACCATC
CGTGCCGCCA TTCCACCGAT GAAGAAAAAC GGCTGGGGCC GGATCATCAA TATTGCCTCT
GCGCATGGCC TCGTGGCATC CCCCTTCAAG TCCGCCTACG TCGCCGCCAA GCATGGTATC
ATGGGGTTGA CGAAGACCGT GGCGCTGGAA GTGGCGGAGA ACGGCATTAC CGTGAATTCG
ATCTGCCCCG GCTACGTTCT AACGCCGCTC GTCGAAAAGC AGATACCGGA CCAGGCGAGA
ACGCGCGGCA TAACCGAGGA GCAGGTGATC AATGAGGTGA TGCTCAAGGG GCAGCCGACA
AAAAAGTTCA TCACCGTCGA ACAGGTGGCT TCTCTGGCGC TTTATCTTGC AAGCGACGAC
GCTTCCCAGA TCACCGGCAC GCATGTCTCA ATGGATGGCG GGTGGACGGC GCAGTAG
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| Protein sequence | MVKTAVITGS TSGIGLAIAR ALAKTGANIV LNGFGTADEI RTVTDEVAGL TSGSVLHHPA
DMTKPSEIAE MMATAASRFG GADILVNNAG VQFVEKIEDF PAEQWDRIVA INLSSSFHTI
RAAIPPMKKN GWGRIINIAS AHGLVASPFK SAYVAAKHGI MGLTKTVALE VAENGITVNS
ICPGYVLTPL VEKQIPDQAR TRGITEEQVI NEVMLKGQPT KKFITVEQVA SLALYLASDD
ASQITGTHVS MDGGWTAQ
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