Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4499 |
Symbol | |
ID | 5317939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 984136 |
End bp | 985626 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776300 |
Product | xanthine dehydrogenase small subunit |
Protein accession | YP_001313232 |
Protein GI | 150376636 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.999061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0980927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGG CACCCGACAG CATCCGCTTC ATCCTGAACG ACACAGAGAT CGCCCTTTCC GATGTTGCCC CGACAGCGAC ACTGCTGGAT TATCTGAGGC TGGAGCGCCG CCTCACCGGC ACCAAGGAAG GCTGTGCCGA GGGCGACTGC GGCGCCTGTA CGGTGCTCGT CGGCCGGCTT GCCCATGATG GCGAAGGAGG CGAGACTACC CTCGTCTATG AGAGCGTAAA CGCCTGTATT CGTTTCATGG GCTCACTCAA CGCCACACAT ATCGTCACGG TCGAGCACCT GGCCGGCAAG GACGGGAAGC TCCATCCCGT GCAGCAGGCA CTCGTGGATT TTCACGGCTC CCAATGCGGC TTCTGCACGC CTGGAATCGT CATGTCGCTG TACGGGCTGT GGCTGACCAA CGACAGACCG GGCCGCGCGG CAATCGAAAA GGCACTGCAG GGCAATCTCT GTCGATGCAC CGGCTACGAA CCGATCGTGC GCGCGGCGGA GGCCGCGGCG GCGGATCGCC CGGACGTTCT CTTCGACCCG ATCACCCGCG TGCGGGAGGC GGTAAGGGCA CGCCTGCAGG AGCTGAGACA AGCCGAAAGG ATCGAAATCC GCAGCGGCGT GGACTGTCTG ATTGTACCCG CCGACGCTGC CGACCTCGCA CGTGTCCTCG CCGATCGTCC CGCGGCCACG ATCGTCGCCG GCTGCACCGA TGTCGGACTT TGGGTGACGA AGCAGATGCG ACCGCTGAAT ACGGTCGTCT TCGTTAACGG CATCGCCGAG CTGCAGCGGA TCGAGAGCTC AAAAGCGGGT CTGACGATCG GAGCAGGCGT CAGCTACTCG GCGGCATACG AGGCCCTTTC CTCCGCCTAC CCGTCGTTCG GCCGGCTTCT CGATCGCGTC GGTGGCGATC AGGTGCGCAA CATGGGCACG ATAGGAGGCA ACATCGCCAA CGGCTCGCCG ATCGGGGACA GCCCGCCGCC GCTGATCGTG CTCGGTGCGA CGCTTACCCT GCGCTCCCAT GGCGGTTCGC GCACGCTCCC GCTCGAGGAT TTCTTCATCG CCTATGGCAA GCAGGATCGC AGGCCGGGGG AATTCGTCGA AAGCATCTTC GTCCCGGCGC TGCCCGCGGG GGAGCGCTTC GCCGCCTATA AGATCTCGAA GCGCCGCGAC GAGGACATTT CCGCGCTGCT TGGCGCCTTC CGCATCTCGC TCGACGGAGA TCGGGTGAAG GCGGCGAGAA TCGCTTTCGG CGGCATGGCG GCAACACCGA AACGGGCAAA GGTCGTCGAA GCGGCCCTGC TCGGCGAATT ATGGAATGAG GGGACGATAC GCGACGCCCA GAGCGCCTTC GATACCGATT ACCAGCCGAT CACCGACTGG CGCGCCACCG GCGCCTATCG CCTGCTTGCG GCGAAGAATC TGCTGATGCG CTTCTTCCTC GAGAGCACCG GGGAGACGGC GCAGCTCCGG CGGTTCGAGG AGGTGGCATG A
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Protein sequence | MEQAPDSIRF ILNDTEIALS DVAPTATLLD YLRLERRLTG TKEGCAEGDC GACTVLVGRL AHDGEGGETT LVYESVNACI RFMGSLNATH IVTVEHLAGK DGKLHPVQQA LVDFHGSQCG FCTPGIVMSL YGLWLTNDRP GRAAIEKALQ GNLCRCTGYE PIVRAAEAAA ADRPDVLFDP ITRVREAVRA RLQELRQAER IEIRSGVDCL IVPADAADLA RVLADRPAAT IVAGCTDVGL WVTKQMRPLN TVVFVNGIAE LQRIESSKAG LTIGAGVSYS AAYEALSSAY PSFGRLLDRV GGDQVRNMGT IGGNIANGSP IGDSPPPLIV LGATLTLRSH GGSRTLPLED FFIAYGKQDR RPGEFVESIF VPALPAGERF AAYKISKRRD EDISALLGAF RISLDGDRVK AARIAFGGMA ATPKRAKVVE AALLGELWNE GTIRDAQSAF DTDYQPITDW RATGAYRLLA AKNLLMRFFL ESTGETAQLR RFEEVA
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